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相关论文: Topological Data Analysis of Spatial Systems

200 篇论文

Topological data analysis (TDA) is a relatively new field that is gaining rapid adoption due to its robustness and ability to effectively describe complex datasets by quantifying geometric information. In imaging contexts, TDA typically…

计算机视觉与模式识别 · 计算机科学 2025-07-15 Aaryam Sharma

Spatial transcriptomics studies are becoming increasingly large and commonplace, necessitating simultaneous analysis of a large number of spatially resolved variables. Correspondingly, a diverse range of methodologies have been proposed to…

定量方法 · 定量生物学 2025-09-09 James Boyle , Gregory Hamm , Eleanor Williams , Robin JG Hartman , Magnus Soderburg , Ian Henry , Michael Casey

Topological methods are very rarely used in structural health monitoring (SHM), or indeed in structural dynamics generally, especially when considering the structure and topology of observed data. Topological methods can provide a way of…

人机交互 · 计算机科学 2022-09-14 Tristan Gowdridge , Nikolaos Dervilis , Keith Worden

Topological data analysis (TDA) is an area of data science that focuses on using invariants from algebraic topology to provide multiscale shape descriptors for geometric data sets such as point clouds. One of the most important such…

计算几何 · 计算机科学 2023-06-21 David Loiseaux , Mathieu Carrière , Andrew J. Blumberg

A time-delay embedding (TDE), grounded in the framework of Takens's Theorem, provides a mechanism to represent and analyze the inherent dynamics of time-series data. Recently, topological data analysis (TDA) methods have been applied to…

统计方法学 · 统计学 2024-10-18 Sixtus Dakurah , Jessi Cisewski-Kehe

Topological Data Analysis (TDA) offers a suite of computational tools that provide quantified shape features in high dimensional data that can be used by modern statistical and predictive machine learning (ML) models. In particular,…

密码学与安全 · 计算机科学 2023-07-06 Dominic Gold , Koray Karabina , Francis C. Motta

Topological data analysis (TDA) provides a growing body of tools for computing geometric and topological information about spaces from a finite sample of points. We present a new adaptive algorithm for finding provably dense samples of…

This paper contains an expository account of persistent homology and its usefulness for topological data analysis. An alternative foundation for level-set persistence is presented using sheaves and cosheaves.

代数拓扑 · 数学 2015-03-05 Justin Curry

In the present article we describe and discuss a framework for applying different topological data analysis (TDA) techniques to a music fragment given as a score in traditional Western notation. We first consider different sets of points in…

代数拓扑 · 数学 2022-12-13 Alberto Alcalá-Alvarez , Pablo Padilla-Longoria

Topological data analysis (TDA) has emerged as one of the most promising techniques to reconstruct the unknown shapes of high-dimensional spaces from observed data samples. TDA, thus, yields key shape descriptors in the form of persistent…

机器学习 · 统计学 2017-11-15 Wei Guo , Krithika Manohar , Steven L. Brunton , Ashis G. Banerjee

Topological data analysis is a relatively new branch of machine learning that excels in studying high dimensional data, and is theoretically known to be robust against noise. Meanwhile, data objects with mixed numeric and categorical…

代数拓扑 · 数学 2020-06-15 Chengyuan Wu , Carol Anne Hargreaves

Topological Data Analysis (TDA) has emerged as a powerful framework for extracting robust and interpretable features from noisy high-dimensional data. In the context of Social Choice Theory, where preference profiles and collective…

代数拓扑 · 数学 2025-07-22 Athanasios Andrikopoulos , Nikolaos Sampanis

Topological Data Analysis (TDA) involves techniques of analyzing the underlying structure and connectivity of data. However, traditional methods like persistent homology can be computationally demanding, motivating the development of neural…

计算机视觉与模式识别 · 计算机科学 2025-11-10 Dylan Peek , Matthew P. Skerritt , Siddharth Pritam , Stephan Chalup

Topological data analysis (TDA) is a rising field in the intersection of mathematics, statistics, and computer science/data science. The cornerstone of TDA is persistent homology, which produces a summary of topological information called a…

计算几何 · 计算机科学 2022-05-24 Yu-Min Chung , Michael Hull , Austin Lawson , Neil Pritchard

Topological Data Analysis (TDA) is a discipline that applies algebraic topology techniques to analyze complex, multi-dimensional data. Although it is a relatively new field, TDA has been widely and successfully applied across various…

机器学习 · 计算机科学 2024-07-29 Martin Uray , Barbara Giunti , Michael Kerber , Stefan Huber

Improvements in experimental and computational technologies have led to significant increases in data available for analysis. Topological data analysis (TDA) is an emerging area of mathematical research that can identify structures in these…

定量方法 · 定量生物学 2022-07-25 Maria-Veronica Ciocanel , Riley Juenemann , Adriana T. Dawes , Scott A. McKinley

One of the most important problems arising in time series analysis is that of bifurcation, or change point detection. That is, given a collection of time series over a varying parameter, when has the structure of the underlying dynamical…

机器学习 · 统计学 2023-03-15 Audun Myers , Firas A. Khasawneh , Elizabeth Munch

Topological Data Analysis (TDA) is a novel new and fast growing field of data science providing a set of new topological and geometric tools to derive relevant features out of complex high-dimensional data. In this paper we apply two of…

计算与语言 · 计算机科学 2019-06-06 Naiereh Elyasi , Mehdi Hosseini Moghadam

Topological Data Analysis (TDA) is a recent and growing branch of statistics devoted to the study of the shape of the data. In this work we investigate the predictive power of TDA in the context of supervised learning. Since topological…

机器学习 · 统计学 2017-09-22 Tullia Padellini , Pierpaolo Brutti

Topological data analysis (TDA) detects geometric structure in biological data. However, many TDA algorithms are memory intensive and impractical for massive datasets. Here, we introduce a statistical protocol that reduces TDA's memory…

定量方法 · 定量生物学 2025-09-05 Andrew J. Stier , Naichen Shi , Raed Al Kontar , Chad Giusti , Marc G. Berman