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相关论文: Persistent homology of the cosmic web. I: Hierarch…

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We use topological data analysis to study "functional networks" that we construct from time-series data from both experimental and synthetic sources. We use persistent homology with a weight rank clique filtration to gain insights into…

定量方法 · 定量生物学 2017-05-24 Bernadette J. Stolz , Heather A. Harrington , Mason A. Porter

We explore the information theory entropy of a graph as a scalar to quantify the cosmic web. We find entropy values in the range between 1.5 and 3.2 bits. We argue that this entropy can be used as a discrete analogue of scalars used to…

宇宙学与河外天体物理 · 物理学 2020-08-20 María Valentina García-Alvarado , Jaime E. Forero-Romero , Xiao-Dong Li

Persistent homology is a cornerstone of topological data analysis, offering a multiscale summary of topology with robustness to nuisance transformations, such as rotations and small deformations. Persistent homology has seen broad use…

统计方法学 · 统计学 2025-11-19 Zitian Wu , Arkaprava Roy , Leo L. Duan

Recently, it was found that there is a remarkable intuitive similarity between studies in theoretical computer science dealing with large data sets on the one hand, and categorical methods of topology and geometry in pure mathematics, on…

代数几何 · 数学 2019-10-23 Yuri I. Manin , Matilde Marcolli

We present a new perspective on the symmetries that govern the formation of large-scale structures across the Universe, particularly focusing on the transition from the seeds of galaxy clusters to the seeds of galaxies themselves. We…

宇宙学与河外天体物理 · 物理学 2024-03-28 Giovanni Montani , Nakia Carlevaro

We follow the evolution of galaxy systems in numerical simulation. Our goal is to understand the role of density perturbations of various scales in the formation and evolution of the cosmic web. We perform numerical simulations with the…

宇宙学与河外天体物理 · 物理学 2011-11-28 I. Suhhonenko , J. Einasto , L. J. Liivamägi , E. Saar , M. Einasto , G. Hütsi , V. Müller , A. A. Starobinsky , E. Tago , E. Tempel

We study structural feature and evolution of the Internet at the autonomous systems level. Extracting relevant parameters for the growth dynamics of the Internet topology, we construct a toy model for the Internet evolution, which includes…

物理与社会 · 物理学 2015-06-26 H. K. Lee , K. -I. Goh , B. Kahng , D. Kim

Persistent Topology studies topological features of shapes by analyzing the lower level sets of suitable functions, called filtering functions, and encoding the arising information in a parameterized version of the Betti numbers, i.e. the…

代数拓扑 · 数学 2010-05-05 Andrea Cerri , Patrizio Frosini

Many datasets can be viewed as a noisy sampling of an underlying space, and tools from topological data analysis can characterize this structure for the purpose of knowledge discovery. One such tool is persistent homology, which provides a…

Topological Data Analysis (TDA) refers to an approach that uses concepts from algebraic topology to study the "shapes" of datasets. The main focus of this paper is persistent homology, a ubiquitous tool in TDA. Basing our study on this, we…

概率论 · 数学 2016-04-15 Takashi Owada

The prediction of critical transitions, such as extinction events, is vitally important to preserving vulnerable populations in the face of a rapidly changing climate and continuously increasing human resource usage. Predicting such events…

定量方法 · 定量生物学 2019-12-04 Laura S. Storch , Sarah L. Day

Convection is a well-studied topic in fluid dynamics, yet it is less understood in the context of networks flows. Here, we incorporate techniques from topological data analysis (namely, persistent homology) to automate the detection and…

动力系统 · 数学 2022-03-15 Minh Quang Le , Dane Taylor

Under the banner of `Big Data', the detection and classification of structure in extremely large, high dimensional, data sets, is, one of the central statistical challenges of our times. Among the most intriguing approaches to this…

统计方法学 · 统计学 2022-06-08 Robert J. Adler , Sarit Agami , Pratyush Pranav

This paper is a cursory study on how topological features are preserved within the internal representations of neural network layers. Using techniques from topological data analysis, namely persistent homology, the topological features of a…

机器学习 · 计算机科学 2022-08-16 Archie Shahidullah

Persistent homology computes the multiscale topology of a data set by using a sequence of discrete complexes. In this paper, we propose that persistent homology may be a useful tool for studying the structure of the landscape of string…

高能物理 - 理论 · 物理学 2019-04-24 Alex Cole , Gary Shiu

The understanding of the immense and intricate topological structure of the World Wide Web (WWW) is a major scientific and technological challenge. This has been tackled recently by characterizing the properties of its representative graphs…

网络与互联网体系结构 · 计算机科学 2008-01-23 M. Angeles Serrano , Ana Maguitman , Marian Boguna , Santo Fortunato , Alessandro Vespignani

On a global level, ecological communities are being perturbed at an unprecedented rate by human activities and environmental instabilities. Yet, we understand little about what factors facilitate or impede long-term persistence of these…

种群与进化 · 定量生物学 2024-10-24 Johannes Nauta , Manlio De Domenico

Topological Data Analysis (TDA) has been applied with success to solve problems across many scientific disciplines. However, in the setting of a point cloud $X$ sampled from a shape $\mathcal{S}$ of low intrinsic dimension embedded within…

代数拓扑 · 数学 2024-11-18 Jonathan M. Mousley , Paul Bendich

One of the paramount challenges in neuroscience is to understand the dynamics of individual neurons and how they give rise to network dynamics when interconnected. Historically, researchers have resorted to graph theory, statistics, and…

神经元与认知 · 定量生物学 2019-02-08 Jean-Baptiste Bardin , Gard Spreemann , Kathryn Hess

Topological methods can provide a way of proposing new metrics and methods of scrutinising data, that otherwise may be overlooked. In this work, a method of quantifying the shape of data, via a topic called topological data analysis will be…

机器学习 · 统计学 2022-09-25 Tristan Gowdridge , Nikolaos Dervilis , Keith Worden