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We consider a model for an epidemic in a population that occupies geographically distinct locations. The disease is spread within subpopulations by contacts between infective and susceptible individuals, and is spread between subpopulations…

概率论 · 数学 2016-02-15 R. McVinish , P. K. Pollett , A. Shausan

As an emergent infectious disease outbreak unfolds, public health response is reliant on information on key epidemiological quantities, such as transmission potential and serial interval. Increasingly, transmission models fit to incidence…

种群与进化 · 定量生物学 2015-06-29 Aaron A. King , Matthieu Domenech de Cellès , Felicia M. G. Magpantay , Pejman Rohani

Diffusion source identification on networks is a problem of fundamental importance in a broad class of applications, including rumor controlling and virus identification. Though this problem has received significant recent attention, most…

社会与信息网络 · 计算机科学 2021-06-18 Quinlan Dawkins , Tianxi Li , Haifeng Xu

We propose a novel stochastic model for the spread of antimicrobial-resistant bacteria in a population, together with an efficient algorithm for fitting such a model to sample data. We introduce an individual-based model for the epidemic,…

Human to human transmissible infectious diseases spread in a population using human interactions as its transmission vector. The early stages of such an outbreak can be modeled by a graph whose edges encode these interactions between…

种群与进化 · 定量生物学 2020-06-11 Goncalo Oliveira

In this paper we study a nonlinear reaction-diffusion system which models an infectious disease caused by bacteria such as those for cholera. One of the significant features in this model is that a certain portion of the recovered human…

偏微分方程分析 · 数学 2022-02-01 Hong-Ming Yin , Jun Zou

Stochastic epidemic models provide an interpretable probabilistic description of the spread of a disease through a population. Yet, fitting these models to partially observed data is a notoriously difficult task due to intractability of the…

统计计算 · 统计学 2022-10-21 Raphael Morsomme , Jason Xu

Compartmental models are the most widely used framework for modeling infectious diseases. These models have been continuously refined to incorporate all the realistic mechanisms that can shape the course of an epidemic outbreak. Building on…

Causal inference across multiple data sources offers a promising avenue to enhance the generalizability and replicability of scientific findings. However, data integration methods for time-to-event outcomes, common in biomedical research,…

统计方法学 · 统计学 2025-05-16 Yi Liu , Alexander W. Levis , Ke Zhu , Shu Yang , Peter B. Gilbert , Larry Han

We study the dynamics of a spatially structured model of worldwide epidemics and formulate predictions for arrival times of the disease at any city in the network. The model is comprised of a system of ordinary differential equations…

斑图形成与孤子 · 物理学 2018-02-14 Lawrence M. Chen , Matt Holzer , Anne Shapiro

We consider the problem of model choice for stochastic epidemic models given partial observation of a disease outbreak through time. Our main focus is on the use of Bayes factors. Although Bayes factors have appeared in the epidemic…

统计计算 · 统计学 2017-10-16 Muteb Alharthi , Theodore Kypraios , Philip D. O'Neill

Epidemic outbreaks are an important healthcare challenge, especially in developing countries where they represent one of the major causes of mortality. Approaches that can rapidly target subpopulations for surveillance and control are…

社会与信息网络 · 计算机科学 2018-07-04 Stefania Rubrichi , Zbigniew Smoreda , Mirco Musolesi

We study the problem of identifying a single infection source in a network under the susceptible-infected-recovered-infected (SIRI) model. We describe the infection model via a state-space model, and utilizing a state propagation approach,…

物理与社会 · 物理学 2015-02-13 Wuhua Hu , Wee Peng Tay , Athul Harilal , Gaoxi Xiao

Physical contacts result in the spread of various phenomena such as viruses, gossips, ideas, packages and marketing pamphlets across a population. The spread depends on how people move and co-locate with each other, or their mobility…

社会与信息网络 · 计算机科学 2021-12-20 Sepanta Zeighami , Cyrus Shahabi , John Krumm

In wireless sensor networks (WSNs), main task of each sensor node is to sense the physical activity (i.e., targets or disaster conditions) and then to report it to the control center for further process. For this, sensor nodes are attached…

网络与互联网体系结构 · 计算机科学 2018-01-16 Rajeev K. Shakya

Denoising diffusion models have driven significant progress in the field of Bayesian inverse problems. Recent approaches use pre-trained diffusion models as priors to solve a wide range of such problems, only leveraging inference-time…

机器学习 · 统计学 2025-02-06 Yazid Janati , Badr Moufad , Mehdi Abou El Qassime , Alain Durmus , Eric Moulines , Jimmy Olsson

Traditional epidemic detection algorithms make decisions using only local information. We propose a novel approach that explicitly models spatial information fusion from several metapopulations. Our method also takes into account…

统计计算 · 统计学 2015-09-15 Michael Ludkovski , Katherine Shatskikh

Mosquitoes are a major vector for malaria, causing hundreds of thousands of deaths in the developing world each year. Not only is the prevention of mosquito bites of paramount importance to the reduction of malaria transmission cases, but…

机器学习 · 统计学 2017-12-07 Yunpeng Li , Davide Zilli , Henry Chan , Ivan Kiskin , Marianne Sinka , Stephen Roberts , Kathy Willis

This work aims to assess the risks of Covid-19 disease spread in diverse daily-life situations (referred to as scenarios) involving crowds of maskless pedestrians, mostly outdoors. More concretely, we develop a method to infer the global…

物理与社会 · 物理学 2021-11-04 Willy Garcia , Simon Mendez , Baptiste Fray , Alexandre Nicolas

We study some simple models of disease transmission on small-world networks, in which either the probability of infection by a disease or the probability of its transmission is varied, or both. The resulting models display epidemic behavior…

统计力学 · 物理学 2009-10-31 Cristopher Moore , M. E. J. Newman
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