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Developing the ability to comprehensively study infections in small populations enables us to improve epidemic models and better advise individuals about potential risks to their health. We currently have a limited understanding of how…

应用统计 · 统计学 2014-10-14 Wen Dong , Katherine A. Heller , Alex Sandy Pentland

We study the problem of identifying infection sources in a network based on the network topology, and a subset of infection timestamps. In the case of a single infection source in a tree network, we derive the maximum likelihood estimator…

社会与信息网络 · 计算机科学 2019-03-06 Wenchang Tang , Feng Ji , Wee Peng Tay

We combine a pedestrian dynamics model with a contact tracing method to simulate the initial spreading of a highly infectious airborne disease in a confined environment. We focus on a medium size population (up to 1000 people) with a small…

物理与社会 · 物理学 2020-04-22 Krithika Rathinakumar , Annalisa Quaini

In this paper, we propose a Boltzmann-type kinetic model of the spreading of an infectious disease on a network. The latter describes the connections among countries, cities or districts depending on the spatial scale of interest. The…

物理与社会 · 物理学 2021-06-25 Nadia Loy , Andrea Tosin

A cholera transmission model incorporating water-borne and horizontal transmissions as well as infectivity of deceased individuals is formulated and studied. The model also describes an imperfect and waning vaccination. Global stability of…

种群与进化 · 定量生物学 2025-04-11 Abdramane Annour Saad , Julien Arino , Patrick M Tchepmo Djomegni , Mahamat S Daoussa Haggar

We describe a new method for evaluating Bayes factors. The key idea is to introduce a hypermodel in which the competing models are components of a mixture distribution. Inference for the mixing probabilities then yields estimates of the…

统计方法学 · 统计学 2016-02-16 Philip D. O'Neill , Theodore Kypraios

We study several bayesian inference problems for irreversible stochastic epidemic models on networks from a statistical physics viewpoint. We derive equations which allow to accurately compute the posterior distribution of the time…

Epidemic spreading often occurs in spatially heterogeneous environments, yet how quenched heterogeneity reshapes its onset and critical dynamics remains poorly understood. The diffusive epidemic process, a minimal reaction-diffusion model…

统计力学 · 物理学 2026-03-24 Valentin Anfray , Hong-Yan Shih

Due to the significance of its various applications, source localization has garnered considerable attention as one of the most important means to confront diffusion hazards. Multi-source localization from a single-snapshot observation is…

机器学习 · 计算机科学 2024-03-26 Zonghan Zhang , Zijian Zhang , Zhiqian Chen

Accurate forecasting of infectious disease dynamics is critical for public health planning and intervention. Human mobility plays a central role in shaping the spatial spread of epidemics, but mobility data are noisy, indirect, and…

人工智能 · 计算机科学 2026-01-21 Suhan Guo , Jiahong Deng , Furao Shen

The study of SIS epidemics on networks has stressed the role of the network topology on the spreading process. However, accurate models of SIS epidemics rely on the complete knowledge of the network topology, which is often not available.…

物理与社会 · 物理学 2017-08-08 Aram Vajdi , Caterina Scoglioy

A differential equations model is developed for the 2014 Ebola epidemics in Sierra Leone, Liberia, and Guinea. The model describes the dynamic interactions of the susceptible and infected populations of these countries. The model…

种群与进化 · 定量生物学 2014-10-23 Cameron Browne , Xi Huo , Pierre Magal , Moussa Seydi , Ousmanne Seydi , Glenn Webb

Evidence-based knowledge of infectious disease burden, including prevalence, incidence, severity and transmission, in different population strata and locations, and possibly in real time, is crucial to the planning and evaluation of public…

统计方法学 · 统计学 2018-08-14 Daniela De Angelis , Anne M. Presanis

The contact structure between hosts has a critical influence on disease spread. However, most networkbased models used in epidemiology tend to ignore heterogeneity in the weighting of contacts. This assumption is known to be at odds with…

种群与进化 · 定量生物学 2012-09-03 Christel Kamp , Mathieu Moslonka-Lefebvre , Samuel Alizon

Mathematical models in epidemiology are an indispensable tool to determine the dynamics and important characteristics of infectious diseases. Apart from their scientific merit, these models are often used to inform political decisions and…

Spatio-temporal pathogen spread is often partially observed at the metapopulation scale. Available data correspond to proxies and are incomplete, censored and heterogeneous. Moreover, representing such biological systems often leads to…

种群与进化 · 定量生物学 2023-12-04 Gaël Beaunée , Pauline Ezanno , Alain Joly , Pierre Nicolas , Elisabeta Vergu

Multidimensional continuous-time Markov jump processes $(Z(t))$ on $\mathbb{Z}^p$ form a usual set-up for modeling $SIR$-like epidemics. However, when facing incomplete epidemic data, inference based on $(Z(t))$ is not easy to be achieved.…

统计方法学 · 统计学 2014-01-03 Romain Guy , Catherine Larédo , Elisabeta Vergu

Mathematical disease modelling has long operated under the assumption that any one infectious disease is caused by one transmissible pathogen spreading among a population. This paradigm has been useful in simplifying the biological reality…

种群与进化 · 定量生物学 2021-06-02 Blake J. M. Williams , Guillaume St-Onge , Laurent Hébert-Dufresne

Infectious diseases on farms pose both public and animal health risks, so understanding how they spread between farms is crucial for developing disease control strategies to prevent future outbreaks. We develop novel Bayesian nonparametric…

应用统计 · 统计学 2021-08-24 R. G. Seymour , T. Kypraios , P. D. O'Neill , T. J. Hagenaars

Epidemics-inspired techniques have received huge attention in recent years from the distributed systems and networking communities. These algorithms and protocols rely on probabilistic message replication and redundancy to ensure reliable…

网络与互联网体系结构 · 计算机科学 2007-11-20 Salvatore Scellato , Cecilia Mascolo , Mirco Musolesi , Vito Latora