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Synchronization strings are recently introduced by Haeupler and Shahrasbi [HS17a] in the study of codes for correcting insertion and deletion errors (insdel codes). A synchronization string is an encoding of the indices of the symbols in a…

信息论 · 计算机科学 2017-10-31 Kuan Cheng , Xin Li , Ke Wu

For any $T \geq 1$, there are constants $R=R(T) \geq 1$ and $\zeta=\zeta(T)>0$ and a randomized algorithm that takes as input an integer $n$ and two strings $x,y$ of length at most $n$, and runs in time $O(n^{1+\frac{1}{T}})$ and outputs an…

数据结构与算法 · 计算机科学 2019-05-10 Michal Koucký , Michael E. Saks

In this work, we study the problem of detecting periodic trends in strings. While detecting exact periodicity has been studied extensively, real-world data is often noisy, where small deviations or mismatches occur between repetitions. This…

数据结构与算法 · 计算机科学 2025-09-22 Taha El Ghazi , Tatiana Starikovskaya

In this paper we define a new problem, motivated by computational biology, $LCSk$ aiming at finding the maximal number of $k$ length $substrings$, matching in both input strings while preserving their order of appearance. The traditional…

数据结构与算法 · 计算机科学 2014-02-11 Gary Benson , Avivit Levy , Riva Shalom

We present an algorithm for approximating the edit distance between two strings of length $n$ in time $n^{1+\varepsilon}$ up to a constant factor, for any $\varepsilon>0$. Our result completes a research direction set forth in the recent…

数据结构与算法 · 计算机科学 2022-07-18 Alexandr Andoni , Negev Shekel Nosatzki

We show that Closest Substring, one of the most important problems in the field of biological sequence analysis, is W[1]-hard when parameterized by the number k of input strings (and remains so, even over a binary alphabet). This problem is…

计算复杂性 · 计算机科学 2007-05-23 Michael R. Fellows , Jens Gramm , Rolf Niedermeier

Edit distance with moves (EDM) is a string-to-string distance measure that includes substring moves in addition to ordinal editing operations to turn one string to the other. Although optimizing EDM is intractable, it has many applications…

数据结构与算法 · 计算机科学 2014-08-27 Yoshimasa Takabatake , Yasuo Tabei , Hiroshi Sakamoto

Given strings $P$ of length $m$ and $T$ of length $n$ over an alphabet of size $\sigma$, the string matching with $k$-mismatches problem is to find the positions of all the substrings in $T$ that are at Hamming distance at most $k$ from…

数据结构与算法 · 计算机科学 2013-08-01 Emanuele Giaquinta , Szymon Grabowski , Kimmo Fredriksson

A pattern $\alpha$ is a string of variables and terminal letters. We say that $\alpha$ matches a word $w$, consisting only of terminal letters, if $w$ can be obtained by replacing the variables of $\alpha$ by terminal words. The matching…

数据结构与算法 · 计算机科学 2022-07-18 Paweł Gawrychowski , Florin Manea , Stefan Siemer

The $k$-ExactCover problem is a parameterized version of the ExactCover problem, in which we are given a universe $U$, a collection $S$ of subsets of $U$, and an integer $k$, and the task is to determine whether $U$ can be partitioned into…

计算复杂性 · 计算机科学 2019-05-21 Venkatesan Guruswami , Patrick Lin

Longest Common Substring (LCS) is an important text processing problem, which has recently been investigated in the quantum query model. The decisional version of this problem, LCS with threshold $d$, asks whether two length-$n$ input…

数据结构与算法 · 计算机科学 2022-11-30 Ce Jin , Jakob Nogler

Text sanitization aims to rewrite parts of a document to prevent disclosure of personal information. The central challenge of text sanitization is to strike a balance between privacy protection (avoiding the leakage of personal information)…

计算与语言 · 计算机科学 2025-09-03 Ildikó Pilán , Benet Manzanares-Salor , David Sánchez , Pierre Lison

In this paper we study the fundamental problem of maintaining a dynamic collection of strings under the following operations: concat - concatenates two strings, split - splits a string into two at a given position, compare - finds the…

数据结构与算法 · 计算机科学 2016-04-11 Paweł Gawrychowski , Adam Karczmarz , Tomasz Kociumaka , Jakub Łącki , Piotr Sankowski

Given a context free language $\mathcal{L(G)}$ over alphabet $\Sigma$ and a string $s \in \Sigma^*$, {\em the language edit distance} problem seeks the minimum number of edits (insertions, deletions and substitutions) required to convert…

数据结构与算法 · 计算机科学 2024-10-25 Tomasz Kociumaka , Barna Saha

Hairpin completion, derived from the hairpin formation observed in DNA biochemistry, is an operation applied to strings, particularly useful in DNA computing. Conceptually, a right hairpin completion operation transforms a string $S$ into…

数据结构与算法 · 计算机科学 2024-04-19 Itai Boneh , Dvir Fried , Shay Golan , Matan Kraus

An exponent-string is an extension of traditional strings that can incorporate real-numbered exponents, indicating the quantity of characters. This novel representation overcomes the limitations of traditional discrete string by enabling…

形式语言与自动机理论 · 计算机科学 2024-08-26 Ingyu Baek

In this paper we are interested in indexing texts for substring matching queries with one edit error. That is, given a text $T$ of $n$ characters over an alphabet of size $\sigma$, we are asked to build a data structure that answers the…

数据结构与算法 · 计算机科学 2014-08-25 Djamal Belazzougui

In this paper, we consider two versions of the Text Assembling problem. We are given a sequence of strings $s^1,\dots,s^n$ of total length $L$ that is a dictionary, and a string $t$ of length $m$ that is texts. The first version of the…

量子物理 · 物理学 2024-04-05 Kamil Khadiev , Carlos Manuel Bosch Machado , Zeyu Chen , Junde Wu

A factorization $f_1, \ldots, f_m$ of a string $w$ of length $n$ is called a repetition factorization of $w$ if $f_i$ is a repetition, i.e., $f_i$ is a form of $x^kx'$, where $x$ is a non-empty string, $x'$ is a (possibly-empty) proper…

数据结构与算法 · 计算机科学 2024-08-09 Yuki Yonemoto , Shunsuke Inenaga

We observe a direct relation between the existence of fundamental axionic strings, dubbed EFT strings, and infinite distance limits in 4d $\mathcal{N}=1$ EFTs coupled to gravity. The backreaction of EFT strings can be interpreted as RG flow…

高能物理 - 理论 · 物理学 2021-10-08 Stefano Lanza , Fernando Marchesano , Luca Martucci , Irene Valenzuela