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Aligning a sequence to a walk in a labeled graph is a problem of fundamental importance to Computational Biology. For finding a walk in an arbitrary graph with $|E|$ edges that exactly matches a pattern of length $m$, a lower bound based on…

数据结构与算法 · 计算机科学 2022-02-01 Daniel Gibney , Sharma V. Thankachan , Srinivas Aluru

We prove essentially tight lower bounds, conditionally to the Exponential Time Hypothesis, for two fundamental but seemingly very different cutting problems on surface-embedded graphs: the Shortest Cut Graph problem and the Multiway Cut…

计算复杂性 · 计算机科学 2021-02-18 Vincent Cohen-Addad , Éric Colin de Verdière , Daniel Marx , Arnaud de Mesmay

We present an analytical approach to study simple symmetric random walks (RWs) on a crossing geometry consisting of a plane square lattice crossed by $n_l$ number of lines that all meet each other at a single point (the origin) on the…

统计力学 · 物理学 2019-09-02 Reza Sepehrinia , Abbas Ali Saberi , Hor Dashti-Naserabadi

We show that the Maximum Weight Independent Set problem (MWIS) can be solved in quasi-polynomial time on $H$-free graphs (graphs excluding a fixed graph $H$ as an induced subgraph) for every $H$ whose every connected component is a path or…

数据结构与算法 · 计算机科学 2025-09-24 Peter Gartland , Daniel Lokshtanov , Tomáš Masařík , Marcin Pilipczuk , Michał Pilipczuk , Paweł Rzążewski

We consider the following problem arising from the study of human problem solving: Let $G$ be a vertex-weighted graph with marked "in" and "out" vertices. Suppose a random walker begins at the in-vertex, steps to neighbors of vertices with…

组合数学 · 数学 2009-05-28 Joshua N. Cooper

Simultaneous Geometric Embedding (SGE) asks whether, for a given collection of graphs on the same vertex set V, there is an embedding of V in the plane that admits a crossing-free drawing with straightline edges for each of the given…

计算几何 · 计算机科学 2023-12-15 Benedikt Künzel , Jonathan Rollin

A periodic temporal graph, in its simplest form, is a graph in which every edge appears exactly once in the first $\Delta$ time steps, and then it reappears recurrently every $\Delta$ time steps, where $\Delta$ is a given period length.…

数据结构与算法 · 计算机科学 2025-04-22 George B. Mertzios , Hendrik Molter , Nils Morawietz , Paul G. Spirakis

Many applications require to learn, mine, analyze and visualize large-scale graphs. These graphs are often too large to be addressed efficiently using conventional graph processing technologies. Many applications have requirements to…

分布式、并行与集群计算 · 计算机科学 2021-04-23 Santosh Pandey , Lingda Li , Adolfy Hoisie , Xiaoye S. Li , Hang Liu

A temporal graph is a graph whose edges appear at certain points in time. These graphs are temporally connected (in class TC) if all vertices can reach each other by temporal paths (traversing the edges in chronological order). Reachability…

离散数学 · 计算机科学 2026-04-21 Arnaud Casteigts , Timothée Corsini , Nils Morawietz

Many NP-Hard problems on general graphs, such as maximum independence set, maximal cliques and graph coloring can be solved efficiently on chordal graphs. In this paper, we explore the problem of non-separating st-paths defined on edges:…

数据结构与算法 · 计算机科学 2021-02-10 Xiao Mao

Large unweighted directed graphs are commonly used to capture relations between entities. A fundamental problem in the analysis of such networks is to properly define the similarity or dissimilarity between any two vertices. Despite the…

机器学习 · 统计学 2015-11-03 Tatsunori B. Hashimoto , Yi Sun , Tommi S. Jaakkola

We show that the following variation of the single-source shortest path problem is NP-complete. Let a weighted, directed, acyclic graph $G=(V,E,w)$ with source and sink vertices $s$ and $t$ be given. Let in addition a mapping $f$ on $E$ be…

计算复杂性 · 计算机科学 2016-07-18 Jesper Larsson Träff

We discuss the complexity of path enumeration and counting in weighted temporal graphs. In a weighted temporal graph, each edge has an availability time, a traversal time and some real cost. We introduce two bicriteria temporal min-cost…

计算复杂性 · 计算机科学 2020-07-10 Petra Mutzel , Lutz Oettershagen

A set S of vertices of a graph is a defensive alliance if, for each element of S, the majority of its neighbors is in S. The problem of finding a defensive alliance of minimum size in a given graph is NP-hard and there are polynomial-time…

计算复杂性 · 计算机科学 2017-07-17 Bernhard Bliem , Stefan Woltran

We revisit the Maximum Node-Disjoint Paths problem, the natural optimization version of Node-Disjoint Paths, where we are given a graph $G$, $k$ pairs of vertices $(s_i, t_i)$ and an integer $\ell$, and are asked whether there exist at…

数据结构与算法 · 计算机科学 2025-09-18 Michael Lampis , Manolis Vasilakis

For any particular class of graphs, algorithms for computational problems restricted to the class often rely on structural properties that depend on the specific problem at hand. This begs the question if a large set of such results can be…

Let $G=(V,E,w)$ be a weighted directed graph without negative cycles. For two vertices $s,t\in V$, we let $d_{\le h}(s,t)$ be the minimum, according to the weight function $w$, of a path from $s$ to $t$ that uses at most $h$ edges, or hops.…

数据结构与算法 · 计算机科学 2024-11-01 Virginia Vassilevska Williams , Zoe Xi , Yinzhan Xu , Uri Zwick

We consider the classic problem of Network Reliability. A network is given together with a source vertex, one or more target vertices, and probabilities assigned to each of the edges. Each edge appears in the network with its associated…

组合数学 · 数学 2019-03-20 Amir Kafshdar Goharshady , Fatemeh Mohammadi

Given a road network modelled as a planar straight-line graph $G=(V,E)$ with $|V|=n$, let $(u,v)\in V\times V$, the shortest path (distance) between $u,v$ is denoted as $\delta_G(u,v)$. Let $\delta(G)=\max_{(u,v)}\delta_G(u,v)$, for…

计算几何 · 计算机科学 2024-05-01 Zhidan Feng , Henning Fernau , Binhai Zhu

We consider the following problem that we call the Shortest Two Disjoint Paths problem: given an undirected graph $G=(V,E)$ with edge weights $w:E \rightarrow \mathbb{R}$, two terminals $s$ and $t$ in $G$, find two internally…

数据结构与算法 · 计算机科学 2024-01-10 Ildikó Schlotter