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The conformational complexity of linear polymers far exceeds that of point-like atoms and molecules. Polymers can bend, twist, even become knotted. Thus they may also display a much richer phase structure than point particles. But it is not…

生物物理 · 物理学 2015-06-16 Andrey Krokhotin , Stam Nicolis , Antti J. Niemi

We compute, in the large $N$ limit, the topologically twisted index of the 3d $T[SU(N)]$ theory, namely the partition function on $\Sigma_{\mathfrak{g}} \times S^1$, with a topological twist on the Riemann surface $\Sigma_{\mathfrak{g}}$.…

高能物理 - 理论 · 物理学 2021-06-16 Lorenzo Coccia

We present a semi-analytical approach to the determination of the dynamic properties of randomly branched polymers under the Rouse approximation. The principle procedure is based on examining a spectrum of eigenvalues which represents the…

统计力学 · 物理学 2009-10-31 Josh P. Kemp , Zheng Yu Chen

We construct an exact expression for the site percolation threshold p_c on a quasi-regular tree, and a related exact lower bound for a quasi-regular graph. Both are given by the inverse spectral radius of the appropriate Hashimoto matrix…

数学物理 · 物理学 2014-11-19 Kathleen E. Hamilton , Leonid P. Pryadko

We develop a theoretical description of the topological disentanglement occurring when torus knots reach the ends of a semi-flexible polymer under tension. These include decays into simpler knots and total unknotting. The minimal number of…

统计力学 · 物理学 2020-11-04 Michele Caraglio , Boris Marcone , Fulvio Baldovin , Enzo Orlandini , Attilio L. Stella

We consider the distributed compression of Soft Random Geometric Graphs (SRGGs) above the connectivity threshold. We establish the Slepian-Wolf rate region for the SRGG in the setting where there are a finite number of encoders compressing…

信息论 · 计算机科学 2026-05-07 Oliver Baker , Carl P. Dettmann

We quantify the topological expansion properties of bounded degree simplicial complexes in terms of a family of sublinear functions, in analogy with the separation profile of Benjamini-Schramm-Tim\'ar for classical expansion of bounded…

度量几何 · 数学 2024-11-21 David Hume

The unfolding of a polymer below the $\theta$ point when pulled by an external force is studied both in d=2 on the lattice and in $d=3$ off lattice. A ground state analysis of finite length chains shows that the globule unfolds via multiple…

统计力学 · 物理学 2009-11-07 D. Marenduzzo , A. Maritan , A. Rosa , F. Seno

Let $G$ be a connected graph of order $n$. A $\{P_{2},C_{3},P_{5},\mathcal{T}(3)\}$-factor of $G$ is a spanning subgraph of $G$ such that each component is isomorphic to a member in $\{P_{2},C_{3},P_{5},\mathcal{T}(3)\}$, where…

组合数学 · 数学 2024-12-23 Xianglong Zhang , Lihua You

The interaction of polymers with small-scale velocity gradients can trigger a coil-stretch transition in the polymers. We analyze this transition within a direct numerical simulation of shear turbulence with an Oldroyd-B model for the…

混沌动力学 · 物理学 2009-11-07 Bruno Eckhardt , Jochen Kronjaeger , Joerg Schumacher

Topologically constrained genome-like polymers often double-fold into tree-like configurations. Here we calculate the exact number of tightly double-folded configurations available to a ring polymer in ideal conditions. For this purpose, we…

软凝聚态物质 · 物理学 2026-03-02 Pieter H. W. van der Hoek , Angelo Rosa , Elham Ghobadpour , Ralf Everaers

Brownian motion and viscoelasticity of semiflexible polymers is a subject that has been studied for many years. Still, rigorous analysis has been hindered due to the difficulty in handling the constraint that polymer chains cannot be…

软凝聚态物质 · 物理学 2024-05-22 Zhongqiang Xiong , Ryohei Seto , Masao Doi

Graph polynomials encode fundamental combinatorial invariants of graphs. Their computation is investigated using tree and path decomposition frameworks, with formal definitions of treewidth, k-trees, and pathwidth establishing the…

离散数学 · 计算机科学 2025-09-29 Mehul Bafna , Shaghik Amirian

We consider a system consisting of a planar random walk on a square lattice, submitted to stochastic elementary local deformations. Depending on the deformation transition rates, and specifically on a parameter $\eta$ which breaks the…

统计力学 · 物理学 2015-06-24 Guy Fayolle , Cyril Furtlehner

We develop a unified scaling framework for the end-position distributions of tethered polymers confined in finite cylindrical geometries. Two observables are analysed: the longitudinal distribution P(x), along the confinement axis, and the…

软凝聚态物质 · 物理学 2025-12-16 Bibhatsu Kuiri , Rittwick Mondal , Dipankar Biswas , Soumyajyoti Kabi

In this paper we describe a physical problem, based on electromagnetic fields, whose topological constraints are higher dimensional versions of Kirchhoff's laws, involving $2-$ simplicial complexes embedded in $\mathbb{R} ^3$ rather than…

组合数学 · 数学 2017-11-17 Hariharan Narayanan , H. Narayanan

A single semiflexible polymer chain folds into a toroidal object under poor solvent conditions. In this study, we examined the morphological change in such a toroidal state as a function of the width and stiffness of the chain together with…

生物物理 · 物理学 2016-09-08 Y. Takenaka , Y. Yoshikawa , Y. Koyama , T. Kanbe , K. Yoshikawa

We construct a micromechanical version of an early model for topologically constrained polymers -- a 2D chain amongst point-like uncrossable obstacles -- which allows us to explicitly elucidate the role of topological forces beyond…

软凝聚态物质 · 物理学 2022-07-13 Ahmad K. Omar , Yuyuan Lu , Lijia An , Zhen-Gang Wang

We investigate the toroidal expanse of an embedded graph G, that is, the size of the largest toroidal grid contained in G as a minor. In the course of this work we introduce a new embedding density parameter, the stretch of an embedded…

组合数学 · 数学 2019-06-06 Markus Chimani , Petr Hlineny , Gelasio Salazar

The segment distribution around the center of gravity is derived for unperturbed ring polymers. We show that, although a small difference is observed, the exact distribution can be well approximated by the Gaussian probability distribution…

软凝聚态物质 · 物理学 2022-06-28 Kazumi Suematsu , Haruo Ogura , Seiichi Inayama , Toshihiko Okamoto