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This article is concerned with a version of the contact process with sexual reproduction on a graph with two levels of interactions modeling metapopulations. The population is spatially distributed into patches and offspring are produced in…

概率论 · 数学 2015-04-08 Eric Foxall , Nicolas Lanchier

Cell movement, for example during embryogenesis or tumor metastasis, is a complex dynamical process resulting from an intricate interplay of multiple components of the cellular migration machinery. At first sight, the paths of migrating…

细胞行为 · 定量生物学 2009-04-17 Peter Dieterich , Rainer Klages , Roland Preuss , Albrecht Schwab

We study a stochastic process describing the onset of spreading dynamics of an epidemic in a population composed by individuals of three classes: susceptible (S), infected (I), and recovered (R). The stochastic process is defined by local…

统计力学 · 物理学 2015-05-13 David R. de Souza , Tânia Tomé

A natural phenomenon occurring in a living system is an outcome of the dynamics of the specific biological network underlying the phenomenon. The collective dynamics have both deterministic and stochastic components. The stochastic nature…

统计力学 · 物理学 2023-09-01 Indrani Bose

We derive a general formulation of the self-organized branching process by considering sandpile dynamics in an evolving population characterized by "birth" (excitation) and "death" (de-excitation) of active sites ($z=1$). New active sites…

适应与自组织系统 · 物理学 2007-05-23 D. E. Juanico , C. Monterola , C. Saloma

This paper studies: (i) the long time behaviour of the empirical distribution of age and normalised position of an age dependent critical branching Markov process conditioned on non-extinction; and (ii) the super-process limit of a sequence…

概率论 · 数学 2007-05-23 Krishna Athreya , Siva Athreya , Srikanth Iyer

We study a stochastic epidemic model consisting of elements (organisms in a community or cells in tissue) with fixed positions, in which damage or disease is transmitted by diffusing agents ("signals") emitted by infected individuals. The…

种群与进化 · 定量生物学 2015-06-05 Fernando P. Faria , Ronald Dickman

Homeostasis is concerned with regulatory mechanisms, present in biological systems, where some specific variable is kept close to a set value as some external disturbance affects the system. Mathematically, the notion of homeostasis can be…

分子网络 · 定量生物学 2024-05-08 Fernando Antoneli , Martin Golubitsky , Jiaxin Jin , Ian Stewart

We study pattern formation of skin cancers by means of numerical simulation of a binary system consisting of cancer and healthy cells. We extend the conventional Model H for macrophase separations by considering a logistic growth of cancer…

软凝聚态物质 · 物理学 2019-03-27 Takuma Hoshino , Ming-Wei Liu , Kuo-An Wu , Hsuan-Yi Chen , Tatsuaki Tsuruyama , Shigeyuki Komura

Recent studies at individual cell resolution have revealed phenotypic heterogeneity in nominally clonal tumor cell populations. The heterogeneity affects cell growth behaviors, which can result in departure from the idealized uniform…

种群与进化 · 定量生物学 2023-10-20 Yue Wang , Joseph X. Zhou , Edoardo Pedrini , Irit Rubin , May Khalil , Roberto Taramelli , Hong Qian , Sui Huang

Confluent populations of elongated cells give rise to ordered patterns seen in nematic phase liquid crystals. We correlate cell elongation and intercellular distance with intercellular alignment using an amorphous spin glass model. We…

Boundary-catalytic branching processes describe a broad class of natural phenomena where the population of diffusing particles grows due to their spontaneous binary branching (e.g., division, fission or splitting) on a catalytic boundary…

统计力学 · 物理学 2026-03-05 Denis S. Grebenkov , Yilin Ye

Density dependence is important in the ecology and evolution of microbial and cancer cells. Typically, we can only measure net growth rates, but the underlying density-dependent mechanisms that give rise to the observed dynamics can…

种群与进化 · 定量生物学 2025-06-04 Linh Huynh , Jacob G. Scott , Peter J. Thomas

One of the key characteristics of multicellular organisms is the ability to establish and maintain shapes, or morphologies, under a variety of physical and chemical perturbations. A quantitative description of the underlying morphological…

组织与器官 · 定量生物学 2019-05-22 Anne-Mieke Reijne , Gunnar Pruessner , Giovanni Sena

At the point of a second order phase transition also termed as a critical point, systems display long range order and their macroscopic behaviors are independent of the microscopic details making up the system. Due to these properties, it…

神经元与认知 · 定量生物学 2017-07-18 Vaibhav Wasnik

The properties of excited nuclear matter and the quest for a phase transition which is expected to exist in this system are the subject of intensive investigations. High energy nuclear collisions between finite nuclei which lead to matter…

核理论 · 物理学 2009-11-06 J. Richert , P. Wagner

We investigate a model of cell division in which the length of telomeres within the cell regulate their proliferative potential. At each cell division the ends of linear chromosomes change and a cell becomes senescent when one or more of…

细胞行为 · 定量生物学 2008-04-23 T. Antal , K. B. Blagoev , S. A. Trugman , S. Redner

For the two dimensional Ising model, we construct the adequate surface tension near criticality. The latter quantity has been shown to play a central role in the study of phase coexistence in a joint limit where the temperature approaches…

概率论 · 数学 2007-05-23 R. J. Messikh

Metastasis, the spread of cancer cells from a primary tumor to secondary location(s) in the human organism, is the ultimate cause of death for the majority of cancer patients. That is why, it is crucial to understand metastases evolution in…

种群与进化 · 定量生物学 2020-06-24 Maroussia Slavtchova-Bojkova , Kaloyan Vitanov

Cell migration is a fundamental process involved in physiological phenomena such as the immune response and morphogenesis, but also in pathological processes, such as the development of tumor metastasis. These functions are effectively…

细胞行为 · 定量生物学 2018-12-26 Christèle Etchegaray , Nicolas Meunier