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In this paper, we present a theory to efficiently deal with mechanical properties of heterogeneous polymer chain in free space and the central problem is to evaluate the diffusion equation and orientation-orientation correlation function,…

生物物理 · 物理学 2019-11-05 Ming Li , Jizeng Wang

We compute the free energy of confinement ${\cal{F}}$ for a wormlike chain (WLC), with persistence length $l_p$, that is confined to the surface of a cylinder of radius $R$ under an external tension $f$ using a mean field variational…

软凝聚态物质 · 物理学 2023-11-28 Greg Morrison , D. Thirumalai

We demonstrate that a semiflexible bundle of wormlike chains exhibits a state-dependent bending stiffness that alters fundamentally its scaling behavior with respect to the standard wormlike chain. We explore the equilibrium conformational…

统计力学 · 物理学 2007-07-26 Claus Heussinger , Mark Bathe , Erwin Frey

Polymer models describing the statistics of biomolecules under confinement have applications to a wide range of single molecule experimental techniques and give insight into biologically relevant processes {\em{in vivo}}. In this paper, we…

生物物理 · 物理学 2023-09-18 Joel Gard , Greg Morrison

The wormlike chain model of stiff polymers is a nonlinear $\sigma$-model in one spacetime dimension in which the ends are fluctuating freely. This causes important differences with respect to the presently available theory which exists only…

软凝聚态物质 · 物理学 2009-11-11 H. Kleinert , A. Chervyakov

This study focuses on comparing the individual polymer chain dynamics in an entangled polymeric liquid under different shear and extension rates. Polymer chains under various shear rates and extension rates were simulated using a…

化学物理 · 物理学 2021-01-15 Behrouz Behdani , Tong Mou , Cody Spratt , Slava Butcovich , Ryan Gettler , Joontaek Park

The growing importance of microfluidic and nanofluidic devices to the study of biological processes has highlighted the need to better understand how confinement affects the behavior of polymers in flow. In this paper we explore one aspect…

软凝聚态物质 · 物理学 2015-06-05 Pinaki Bhattacharyya , Binny J. Cherayil

When the local intrinsic stiffness of a polymer chain varies over a wide range, one can observe both a crossover from rigid-rod-like behavior to (almost) Gaussian random coils and a further crossover towards self-avoiding walks in good…

软凝聚态物质 · 物理学 2015-03-17 Hsiao-Ping Hsu , Wolfgang Paul , Kurt Binder

The endpoint distribution and dynamics of semiflexible fibers is studied by numerical simulation. A brief overview is given over the analytical theory of flexible and semiflexible polymers. In particular, a closed expression is given for…

软凝聚态物质 · 物理学 2013-06-13 Robert D. Groot

We consider an inextensible, semiflexible polymer or worm-like chain, with persistence length $P$ and contour length $L$, fluctuating in a cylindrical channel of diameter $D$. In the regime $D\ll P\ll L$, corresponding to a long, tightly…

软凝聚态物质 · 物理学 2015-05-19 Theodore W. Burkhardt , Yingzi Yang , Gerhard Gompper

In biology, there are several processes in which unfolded protein chains are transported along narrow-tube channels. Normally, without such a severe configurational constraint, unfolded polypeptides would not bind to each other. However,…

软凝聚态物质 · 物理学 2019-09-19 Gillian M. Fraser , Eugene M. Terentjev

We consider the continuum limit of a recently-introduced model for discretized thick polymers, or tubes. We address both analytically and numerically how the polymer thickness influences the decay of tangent-tangent correlations and find…

统计力学 · 物理学 2016-08-31 D. Marenduzzo , C. Micheletti , H. Seyed-allaei , A. Trovato , A. Maritan

We derive the linear force-extension relation for a wormlike chain of arbitrary stiffness including entropy elasticity, bending and thermodynamic buckling. From this we infer the plateau modulus $G^0$ of an isotropic entangled solution of…

凝聚态物理 · 物理学 2009-10-28 Klaus Kroy , Erwin Frey

We present an analytical and computational study characterizing the structural and dynamical properties of an active filament confined in cylindrical channels. We first outline the effects of the interplay between confinement and polar…

软凝聚态物质 · 物理学 2024-10-09 José Martín-Roca , Emanuele Locatelli , Valentino Bianco , Paolo Malgaretti , Chantal Valeriani

We consider an inextensible, semiflexible polymer or worm-like chain which is confined in the transverse direction by a parabolic potential and subject to a longitudinal force at the ends, so that the polymer is stretched out and…

软凝聚态物质 · 物理学 2015-05-28 Theodore W. Burkhardt

We elucidate the elastic behavior of a wormlike chain in 3D under compression and provide exact solutions for the experimentally accessible force-extension relation in terms of generalized spheroidal wave functions. In striking contrast to…

软凝聚态物质 · 物理学 2019-11-11 Christina Kurzthaler

We develop an analytical method for studying the properties of a non-interacting Wormlike Chain (WLC) in confined geometries. The mean field-like theory replaces the rigid constraints of confinement with average constraints, thus allowing…

软凝聚态物质 · 物理学 2009-11-13 Greg Morrison , D. Thirumalai

We introduce a new model for the dynamics of a wormlike chain in an environment that gives rise to a rough free energy landscape, which we baptise the glassy wormlike chain. It is obtained from the common wormlike chain by an exponential…

软凝聚态物质 · 物理学 2007-12-02 K. Kroy , J. Glaser

The relation between force and stretch in the worm-like chain model of entropic elasticity is examined. Although no closed-form expression is valid for all values of forcing, solutions in the form of asymptotic series can be obtained under…

材料科学 · 物理学 2007-07-27 Andrew N. Norris

A quantitative theory of the buckling of a worm like chain based on a semi-classical approximation of the partition function is presented. The contribution of thermal fluctuations to the force-extension relation that allows to go beyond the…

软凝聚态物质 · 物理学 2016-08-14 Marc Emanuel , Hervé Mohrbach , Mehmet Sayar , Helmut Schiessel , Igor M. Kulić
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