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A primary challenge in metagenomics is reconstructing individual microbial genomes from the mixture of short fragments created by sequencing. Recent work leverages the sparsity of the assembly graph to find $r$-dominating sets which enable…

数据结构与算法 · 计算机科学 2023-01-24 Yosuke Mizutani , Annie Staker , Blair D. Sullivan

We investigate dynamics of an inference algorithm termed the belief propagation (BP) when employed in spin glass (SG) models and show that its macroscopic behaviors can be traced by recursive updates of certain auxiliary field distributions…

无序系统与神经网络 · 物理学 2009-11-07 Yoshiyuki Kabashima

This study investigated typical performance of approximation algorithms known as belief propagation, greedy algorithm, and linear-programming relaxation for maximum coverage problems on sparse biregular random graphs. After using the cavity…

无序系统与神经网络 · 物理学 2018-02-27 Satoshi Takabe , Takanori Maehara , Koji Hukushima

A continuous-time projection quantum Monte Carlo algorithm is employed to simulate the ground state of a short-range quantum spin-glass model, namely, the two-dimensional Edwards-Anderson Hamiltonian with transverse field, featuring…

无序系统与神经网络 · 物理学 2024-12-24 L. Brodoloni , S. Pilati

We investigate the parameterized complexity of generalisations and variations of the dominating set problem on classes of graphs that are nowhere dense. In particular, we show that the distance-d dominating-set problem, also known as the…

数据结构与算法 · 计算机科学 2009-07-27 Anuj Dawar , Stephan Kreutzer

The spread of an epidemic is often modeled by an SIR random process on a social network graph. The MinINF problem for optimal social distancing involves minimizing the expected number of infections, when we are allowed to break at most $B$…

数据结构与算法 · 计算机科学 2022-02-18 Amy Babay , Michael Dinitz , Aravind Srinivasan , Leonidas Tsepenekas , Anil Vullikanti

In this article, we consider the problem of computing minimum dominating set for a given set $S$ of $n$ points in $\IR^2$. Here the objective is to find a minimum cardinality subset $S'$ of $S$ such that the union of the unit radius disks…

数据结构与算法 · 计算机科学 2014-01-07 Ramesh K. Jallu , Prajwal R. Prasad , Gautam K. Das

We study a multi-species spin glass system where the density of each species is kept fixed at increasing volumes. The model reduces to the Sherrington-Kirkpatrick one for the single species case. The existence of the thermodynamic limit is…

数学物理 · 物理学 2014-04-14 Adriano Barra , Pierluigi Contucci , Emanuele Mingione , Daniele Tantari

We introduce a comprehensive theoretical and algorithmic framework that bridges formal group theory and group entropies with modern machine learning, paving the way for an infinite, flexible family of Mirror Descent (MD) optimization…

机器学习 · 计算机科学 2026-03-10 Andrzej Cichocki , Piergiulio Tempesta

Todays astrometry has reached the micro-arcsecond level in angular measurements of celestial objects. The next generations of astrometric facilities are aiming at the sub-micro-arcsecond scale. Sub-micro-arcsecond astrometry requires a…

广义相对论与量子宇宙学 · 物理学 2025-10-07 Sven Zschocke

Numerous problems consisting in identifying vertices in graphs using distances are useful in domains such as network verification and graph isomorphism. Unifying them into a meta-problem may be of main interest. We introduce here a…

计算复杂性 · 计算机科学 2018-10-10 Florian Barbero , Lucas Isenmann , Jocelyn Thiebaut

Mirror descent (MD) is a powerful first-order optimization technique that subsumes several optimization algorithms including gradient descent (GD). In this work, we develop a semi-definite programming (SDP) framework to analyze the…

最优化与控制 · 数学 2022-01-19 Youbang Sun , Mahyar Fazlyab , Shahin Shahrampour

We study the approximability of the maximum size independent set (MIS) problem in bounded degree graphs. This is one of the most classic and widely studied NP-hard optimization problems. We focus on the well known minimum degree greedy…

数据结构与算法 · 计算机科学 2020-02-03 Piotr Krysta , Mathieu Mari , Nan Zhi

The random assignment problem asks for the minimum-cost perfect matching in the complete $n\times n$ bipartite graph $\Knn$ with i.i.d. edge weights, say uniform on $[0,1]$. In a remarkable work by Aldous (2001), the optimal cost was shown…

概率论 · 数学 2009-02-04 Justin Salez , Devavrat Shah

Using Monte Carlo simulations (MCS) and the Migdal-Kadanoff approximation (MKA), Marinari et al. study in their comment on our paper the link overlap between two replicas of a three-dimensional Ising spin glass in the presence of a coupling…

无序系统与神经网络 · 物理学 2009-10-31 H. Bokil , A. J. Bray , B. Drossel , M. A. Moore

Retraction note: After posting the manuscript on arXiv, we were informed by Erik Jan van Leeuwen that both results were known and they appeared in his thesis[vL09]. A PTAS for MDS is at Theorem 6.3.21 on page 79 and A PTAS for MCDS is at…

数据结构与算法 · 计算机科学 2021-09-20 Jittat Fakcharoenphol , Pattara Sukprasert

We commence the study of domination in the incidence graphs of combinatorial designs. Let $D$ be a combinatorial design and denote by $\gamma(D)$ the domination number of the incidence (Levy) graph of $D$. We obtain a number of results…

组合数学 · 数学 2014-05-15 Felix Goldberg , Deepak Rajendraprasad , Rogers Mathew

We consider an Erdos-Renyi random graph consisting of N vertices connected by randomly and independently drawing an edge between every pair of them with probability c/N so that at N->infinity one obtains a graph of finite mean degree c. In…

无序系统与神经网络 · 物理学 2022-03-29 Pawat Akara-pipattana , Thiparat Chotibut , Oleg Evnin

Dominating set is a set of vertices of a graph such that all other vertices have a neighbour in the dominating set. We propose a new order-based randomised local search (RLS$_o$) algorithm to solve minimum dominating set problem in large…

社会与信息网络 · 计算机科学 2017-11-06 David Chalupa

In 2002 Biskup et al. [Europhys. Lett. 60, 21 (2002)] sketched a rigorous proof for the behavior of the 2D Ising lattice gas, at a finite volume and a fixed excess \delta M of particles (spins) above the ambient gas density (spontaneous…

统计力学 · 物理学 2009-07-20 Andreas Nußbaumer , Elmar Bittner , Wolfhard Janke