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Chemical reaction network theory provides powerful tools for rigorously understanding chemical reactions and the dynamical systems and differential equations that represent them. A frequent issue with mathematical analyses of these networks…

定量方法 · 定量生物学 2025-12-23 Joseph M. Sauder , Bruce P. Ayati , Ryan Kinser

We introduce an algebra qCCS of pure quantum processes in which no classical data is involved, communications by moving quantum states physically are allowed, and computations is modeled by super-operators. An operational semantics of qCCS…

量子物理 · 物理学 2010-09-08 Mingsheng Ying , Yuan Feng , Runyao Duan , Zhengfeng Ji

This article is concerned with the asymptotic accuracy of the Computational Singular Perturbation (CSP) method developed by Lam and Goussis to reduce the dimensionality of a system of chemical kinetics equations. The method exploits the…

动力系统 · 数学 2007-05-23 Antonios Zagaris , Hans G. Kaper , Tasso J. Kaper

In \cite{BCP}, the authors built and studied an algorithm based on the (self)-interaction of a dynamics with its occupation measure to approximate Quasi-Stationary Distributions (QSD) of general Markov chains conditioned to stay in a…

概率论 · 数学 2025-06-27 Mohamed Alfaki Aboubacrine Assadeck , Fabien Panloup

Controlable strong interaction of the qubit's bath with an external system (i.e. with the bath's environment) allows for choosing the conditions under which the decoherence of the qubit's states can be substantially decreased (in a certain…

量子物理 · 物理学 2012-03-01 Miroljub Dugić

The issue of realization of the transfer functions of Linear Quantum Stochastic Systems (LQSSs) is of fundamental importance for the practical applications of such systems, especially as coherent controllers for other quantum systems. So…

量子物理 · 物理学 2016-09-08 Symeon Grivopoulos , Ian Petersen

Detailed balance of a chemical reaction network can be defined in several different ways. Here we investigate the relationship among four types of detailed balance conditions: deterministic, stochastic, local, and zero-order local detailed…

概率论 · 数学 2021-01-27 Chen Jia , Da-Quan Jiang , Youming Li

Establishing a predictive ab initio method for solid systems is one of the fundamental goals in condensed matter physics and computational materials science. The central challenge is how to encode a highly-complex quantum-many-body wave…

强关联电子 · 物理学 2021-05-25 Nobuyuki Yoshioka , Wataru Mizukami , Franco Nori

The task of testing whether two uncharacterized quantum devices behave in the same way is crucial for benchmarking near-term quantum computers and quantum simulators, but has so far remained open for continuous-variable quantum systems. In…

量子物理 · 物理学 2023-05-29 Ya-Dong Wu , Yan Zhu , Ge Bai , Yuexuan Wang , Giulio Chiribella

Polynomial dynamical systems (DSs) can model a wide range of physical processes. A special subset of these DSs that can model chemical reactions under mass-action kinetics is called chemical dynamical systems (CDSs). A fundamental problem,…

分子网络 · 定量生物学 2025-08-04 Tomislav Plesa

We study two specific measures of quality of chemical reaction networks, Precision and Sensitivity. The two measures arise in the study of sensory adaptation, in which the reaction network is viewed as an input-output system. Given a step…

动力系统 · 数学 2016-01-05 Tom F. A. de Greef , Saeed Masroor , Mark A. Peletier , Rudi A. Pendavingh

Time evolution in several classes of quantum devices is generated through the application of quantum gates. Resetting is a critical technological feature in these systems allowing for mid-circuit measurement and complete or partial qubit…

量子物理 · 物理学 2025-05-14 Sascha Wald , Louie Hong Yao , Thierry Platini , Chris Hooley , Federico Carollo

We introduce a physical approach to social networks (SNs) in which each actor is characterized by a yes-no test on a physical system. This allows us to consider SNs beyond those originated by interactions based on pre-existing properties,…

物理与社会 · 物理学 2012-07-17 Adan Cabello , Lars Eirik Danielsen , Antonio J. Lopez-Tarrida , Jose R. Portillo

Across many disciplines, chemical reaction networks (CRNs) are an established population model defined as a system of coupled nonlinear ordinary differential equations. In many applications, for example, in systems biology and epidemiology,…

系统与控制 · 电气工程与系统科学 2023-01-23 Kim G. Larsen , Daniele Toller , Mirco Tribastone , Max Tschaikowski , Andrea Vandin

This paper presents a new systematic framework for nonlinear singularly perturbed systems in which state-dependent perturbation functions are used instead of constant perturbation coefficients. Under this framework, general results are…

最优化与控制 · 数学 2024-06-04 Tengfei Liu , Zhong-Ping Jiang

Boolean networks have been used successfully in modeling biological networks and provide a good framework for theoretical analysis. However, the analysis of large networks is not trivial. In order to simplify the analysis of such networks,…

分子网络 · 定量生物学 2013-11-29 Alan Veliz-Cuba , Reinhard Laubenbacher , Boris Aguilar

Bosons in one dimension display a phenomenon called quasi-condensation, where correlations decay in a powerlaw fashion. We study the fate of quasi-condensation in the non-equilibrium steady-state of a chain of hard-core bosons coupled to…

介观与纳米尺度物理 · 物理学 2023-03-29 T. O. Puel , S. Chesi , S. Kirchner , P. Ribeiro

Stochastic Chemical Reaction Networks are continuous time Markov chain models that describe the time evolution of the molecular counts of species interacting stochastically via discrete reactions. Such models are ubiquitous in systems and…

定量方法 · 定量生物学 2024-02-01 Theodore W. Grunberg , Domitilla Del Vecchio

We describe our recent results on the resonant perturbation theory of decoherence and relaxation for quantum system with many qubits. The approach represents a rigorous analysis of the phenomenon of decoherence and relaxation for general…

量子物理 · 物理学 2009-11-17 M. Merkli , G. P. Berman , I. M. Sigal

Few-Shot Learning (FSL) algorithms have made substantial progress in learning novel concepts with just a handful of labelled data. To classify query instances from novel classes encountered at test-time, they only require a support set…

机器学习 · 计算机科学 2021-08-06 Etienne Bennequin , Victor Bouvier , Myriam Tami , Antoine Toubhans , Céline Hudelot
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