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We present an efficient implementation of ground and excited state CCSD gradients based on Cholesky-decomposed electron repulsion integrals. Cholesky decomposition, like density-fitting, is an inner projection method, and thus similar…

化学物理 · 物理学 2022-08-24 Anna Kristina Schnack-Petersen , Henrik Koch , Sonia Coriani , Eirik F. Kjønstad

In this contribution, we present the implementation of a second-order CASSCF algorithm in conjunction with the Cholesky decomposition of the two-electron repulsion integrals. The algorithm, called Norm-Extended Optimization, guarantees…

化学物理 · 物理学 2021-04-09 Tommaso Nottoli , Jürgen Gauss , Filippo Lipparini

The Cholesky decomposition is a fundamental tool for solving linear systems with symmetric and positive definite matrices which are ubiquitous in linear algebra, optimization, and machine learning. Its numerical stability can be improved by…

机器学习 · 计算机科学 2025-07-29 Filip de Roos , Fabio Muratore

In this paper we present a method for matrix inversion based on Cholesky decomposition with reduced number of operations by avoiding computation of intermediate results; further, we use fixed point simulations to compare the numerical…

数学软件 · 计算机科学 2013-10-21 Aravindh Krishnamoorthy , Deepak Menon

To treat the electronic structure of large molecules by electron propagator methods we developed a parallel computer program called P-RICD$\Sigma$. The program exploits the sparsity of the two-electron integral matrix by using Cholesky…

化学物理 · 物理学 2010-01-28 Victor P. Vysotskiy , Lorenz S. Cederbaum

The description of weakly bound electronic states is especially difficult with atomic orbital basis sets. The diffuse atomic basis functions that are necessary to describe the extended electronic state generate significant linear…

化学物理 · 物理学 2019-12-30 Susi Lehtola

The modified Cholesky decomposition is commonly used for precision matrix estimation given a specified order of random variables. However, the order of variables is often not available or cannot be pre-determined. In this work, we propose…

机器学习 · 统计学 2021-11-23 Xiaoning Kang , Xinwei Deng

We review strategies for differentiating matrix-based computations, and derive symbolic and algorithmic update rules for differentiating expressions containing the Cholesky decomposition. We recommend new `blocked' algorithms, based on…

统计计算 · 统计学 2016-02-25 Iain Murray

The computation of magnetizability tensors using gauge-including atomic orbitals is discussed in the context of Cholesky decomposition for the two-electron repulsion integrals with a focus on the involved doubly differentiated integrals.…

化学物理 · 物理学 2024-11-14 Sophia Burger , Stella Stopkowicz , Jürgen Gauss

A new algorithm to approximate Hermitian matrices by positive semidefinite Hermitian matrices based on modified Cholesky decompositions is presented. In contrast to existing algorithms, this algorithm allows to specify bounds on the…

数值分析 · 数学 2019-12-12 Joscha Reimer

Algorithms involving Gaussian processes or determinantal point processes typically require computing the determinant of a kernel matrix. Frequently, the latter is computed from the Cholesky decomposition, an algorithm of cubic complexity in…

统计计算 · 统计学 2021-07-23 Simon Bartels , Wouter Boomsma , Jes Frellsen , Damien Garreau

The Cholesky decomposition plays an important role in finding the inverse of the correlation matrices. As it is a fast and numerically stable for linear system solving, inversion, and factorization compared to singular valued decomposition…

交换代数 · 数学 2017-03-20 Vanita Pawar , Krishna Naik Karamtot

A new runtime environment for the execution of recursive matrix algorithms on a supercomputer with distributed memory is proposed. It is designed both for dense and sparse matrices. The environment ensures decentralized control of the…

符号计算 · 计算机科学 2023-03-21 Gennadi Malaschonok , Alla Sidko

We develop an accelerated algorithm for computing an approximate eigenvalue decomposition of bistochastic normalized kernel matrices. Our approach constructs a low rank approximation of the original kernel matrix by the pivoted partial…

数值分析 · 数学 2025-11-13 Chris Vales , Dimitrios Giannakis

We propose a new algorithm for efficiently solving the damped Fisher matrix in large-scale scenarios where the number of parameters significantly exceeds the number of available samples. This problem is fundamental for natural gradient…

机器学习 · 计算机科学 2023-10-27 Yixiao Chen , Hao Xie , Han Wang

We propose a very simple preprocessing algorithm for semidefinite programming. Our algorithm inspects the constraints of the problem, deletes redundant rows and columns in the constraints, and reduces the size of the variable matrix. It…

最优化与控制 · 数学 2016-08-09 Preston Faulk , Gabor Pataki , Quoc Tran-Dinh

Randomly pivoted Cholesky (RPCholesky) is an algorithm for constructing a low-rank approximation of a positive-semidefinite matrix using a small number of columns. This paper develops an accelerated version of RPCholesky that employs block…

数值分析 · 数学 2025-04-08 Ethan N. Epperly , Joel A. Tropp , Robert J. Webber

Linear models have found widespread use in statistical investigations. For every linear model there exists a matrix representation for which the ReML (Restricted Maximum Likelihood) can be constructed from the elements of the corresponding…

高能物理 - 实验 · 物理学 2013-07-31 John R. Smith , Milan Nikolic , Stephen P. Smith

Kernel methods represent some of the most popular machine learning tools for data analysis. Since exact kernel methods can be prohibitively expensive for large problems, reliable low-rank matrix approximations and high-performance…

数值分析 · 数学 2018-04-17 Jianwei Xiao , Ming Gu

Large kernel systems are prone to be ill-conditioned. Pivoted Cholesky decomposition (PCD) render a stable and efficient solution to the systems without a perturbation of regularization. This paper proposes a new PCD algorithm by tuning…

数值分析 · 数学 2019-04-29 Dishi Liu , Hermann G. Matthies
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