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In the simulation of biological molecules, it is customary to impose constraints on the fastest degrees of freedom to increase the time step. The evaluation of the involved constraint forces must be performed in an efficient manner, for…

计算物理 · 物理学 2019-11-01 Pablo García-Risueño

First-order variational equations are widely used in N-body simulations to study how nearby trajectories diverge from one another. These allow for efficient and reliable determinations of chaos indicators such as the Maximal Lyapunov…

地球与行星天体物理 · 物理学 2016-03-23 Hanno Rein , Daniel Tamayo

Particle methods are widely used because they can provide accurate descriptions of evolving measures. Recently it has become clear that by stepping outside the Monte Carlo paradigm these methods can be of higher order with effective and…

概率论 · 数学 2012-08-21 C. Litterer , T. Lyons

The simulation of systems that act on multiple time scales is challenging. A stable integration of the fast dynamics requires a highly accurate approximation whereas for the simulation of the slow part, a coarser approximation is accurate…

数值分析 · 数学 2024-06-21 Sina Ober-Blöbaum , Theresa Wenger , Tobias Gail , Sigrid Leyendecker

A wide range of implicit time integration methods, including multi-step, implicit Runge-Kutta, and Galerkin finite-time element schemes, is evaluated in the context of chaotic dynamical systems. The schemes are applied to solve the Lorenz…

计算物理 · 物理学 2024-01-02 Viktoriya Morozova , James G. Coder , Kevin Holst

Hamiltonian trajectories are strictly time-reversible. Any time series of Hamiltonian coordinates {q} satisfying Hamilton's motion equations will likewise satisfy them when played "backwards", with the corresponding momenta changing signs :…

统计力学 · 物理学 2013-03-12 Wm. G. Hoover , Carol G. Hoover

Classical molecular dynamics simulation is performed mostly using the established velocity Verlet integrator or other symplectic propagation schemes. In this work, an alternative formulation of numerical propagators for classical molecular…

化学物理 · 物理学 2024-07-22 Ivan Kondov

A series of robust and optimal mixed methods based on two mixed formulations of the fourth-order elliptic singular perturbation problem are developed in this paper. First, a mixed method based on a second-order system is proposed without…

数值分析 · 数学 2025-09-18 Xuehai Huang , Zheqian Tang

This article is concerned with a new filtered two-step variational integrator for solving the charged-particle dynamics in a mildly non-uniform moderate or strong magnetic field with a dimensionless parameter $\varepsilon$ inversely…

数值分析 · 数学 2026-03-05 Ting Li , Bin Wang

Conservative symmetric second-order one-step integrators are derived using the Discrete Multiplier Method for a family of vortex-blob models approximating the incompressible Euler's equations on the plane. Conservative properties and second…

数值分析 · 数学 2022-08-31 Cem Gormezano , Jean-Christophe Nave , Andy T. S. Wan

We have proposed new algorithms for the numerical integration of the equations of motion for classical spin systems. In close analogy to symplectic integrators for Hamiltonian equations of motion used in Molecular Dynamics these algorithms…

统计力学 · 物理学 2009-10-31 M. Krech , Alex Bunker , D. P. Landau

A new approach is developed to integrate numerically the equations of motion for systems of interacting rigid polyatomic molecules. With the aid of a leapfrog framework, we directly involve principal angular velocities into the integration,…

计算物理 · 物理学 2007-05-23 Igor P. Omelyan

This paper describes a fourth-order integration algorithm for the gravitational N-body problem based on discrete Lagrangian mechanics. When used with shared timesteps, the algorithm is momentum conserving and symplectic. We generalize the…

天体物理学 · 物理学 2010-11-11 Will M. Farr , Edmund Bertschinger

We present an efficient variational integrator for multibody systems. Variational integrators reformulate the equations of motion for multibody systems as discrete Euler-Lagrange (DEL) equations, transforming forward integration into a…

机器人学 · 计算机科学 2018-02-06 Jeongseok Lee , C. Karen Liu , Frank C. Park , Siddhartha S. Srinivasa

Using existing, forward-in-time integration schemes, we demonstrate that it is possible to compute unstable, saddle-type fixed points of stiff systems of ODEs when the stable compenents are fast (i.e., rapidly damped) while the unstable…

混沌动力学 · 物理学 2007-05-23 C. W. Gear , Ioannis Kevrekidis

The Minkowski operators (addition and substraction of sets in vectorial spaces) has been extensively used for Computer Graphics and Image Processing to represent complex shapes. Here we propose to apply those mathematical concepts to extend…

材料科学 · 物理学 2013-05-29 Sergio-Andres Galindo-Torres , Fernando Alonso-Marroquin

Exponential integrators are time stepping schemes which exactly solve the linear part of a semilinear ODE system. This class of schemes requires the approxima- tion of a matrix exponential in every step, and one successful modern method is…

数值分析 · 数学 2016-08-09 Daniel Stone , Gabriel Lord

For a separable Hamiltonian, there are two fundamental, time-symmetric, second-order velocity-Verlet (VV) and position-Verlet (PV) symplectic integrators. Similarly, there are two VV and PV version of exact energy conserving algorithms for…

等离子体物理 · 物理学 2021-11-17 Siu A. Chin

In simulating physical systems, conservation of the total energy is often essential, especially when energy conversion between different forms of energy occurs frequently. Recently, a new fourth order energy-preserving integrator named MB4…

数值分析 · 数学 2020-03-11 Tsubasa Sakai , Shuhei Kudo , Hiroto Imachi , Yuto Miyatake , Takeo Hoshi , Yusaku Yamamoto

The efficient approximation of highly oscillatory integrals plays an important role in a wide range of applications. Whilst traditional quadrature becomes prohibitively expensive in the high-frequency regime, Levin methods provide a way to…

数值分析 · 数学 2025-03-13 Arieh Iserles , Georg Maierhofer