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This paper uses new and existing methods to study collective trends across countries throughout the pandemic, with a focus on the multivariate time series of reproduction numbers and vaccine proliferation. We begin with a time-varying…

物理与社会 · 物理学 2023-10-16 Nick James , Max Menzies

Epidemiological models for the spread of pathogens in a population are usually only able to describe a single pathogen. This makes their application unrealistic in cases where multiple pathogens with similar symptoms are spreading…

社会与信息网络 · 计算机科学 2018-05-16 Nir Levy , Michael Iv , Elad Yom-Tov

Short-time human travel behaviour can be described by a power law with respect to distance. We incorporate this information in space-time models for infectious disease surveillance data to better capture the dynamics of disease spread. Two…

统计方法学 · 统计学 2014-11-25 Sebastian Meyer , Leonhard Held

A primary quantity of interest in the study of infectious diseases is the average number of new infections that an infected person produces. This so-called reproduction number has significant implications for the disease progression. There…

In this paper, the authors develop a method of detecting correlations between epidemic patterns in different regions that are due to human movement and introduce a null model in which the travel-induced correlations are cancelled. They…

种群与进化 · 定量生物学 2008-06-24 Pascal Crépey , Marc Barthélemy

Early estimates of the transmission potential of emerging and re-emerging infections are increasingly used to inform public health authorities on the level of risk posed by outbreaks. Existing methods to estimate the reproduction number…

定量方法 · 定量生物学 2016-10-10 Gerardo Chowell , Cécile Viboud , Lone Simonsen , Seyed Moghadas

A prompt public health response to a new epidemic relies on the ability to monitor and predict its evolution in real time as data accumulate. The 2009 A/H1N1 outbreak in the UK revealed pandemic data as noisy, contaminated, potentially…

Seasonal influenza is a sometimes surprisingly impactful disease, causing thousands of deaths per year along with much additional morbidity. Timely knowledge of the outbreak state is valuable for managing an effective response. The current…

种群与进化 · 定量生物学 2020-07-01 Reid Priedhorsky , Ashlynn R. Daughton , Martha Barnard , Fiona O'Connell , Dave Osthus

A new age-distributed immuno-epidemiological model with information-based vaccine uptake suggested in this work represents a system of integro-differential equations for the numbers of susceptible individuals, infected individuals,…

种群与进化 · 定量生物学 2024-04-02 Samiran Ghosh , Malay Banerjee , Vitaly Volpert

In the face of serious infectious diseases, governments endeavour to implement containment measures such as public vaccination at a macroscopic level. Meanwhile, individuals tend to protect themselves by avoiding contacts with infections at…

物理与社会 · 物理学 2016-10-20 Xiao-Long Peng , Xin-Jian Xu , Michael Small , Xinchu Fu , Zhen Jin

We study the spread of susceptible-infected-recovered (SIR) infectious diseases where an individual's infectiousness and probability of recovery depend on his/her "age" of infection. We focus first on early outbreak stages when stochastic…

种群与进化 · 定量生物学 2009-05-14 Joel Miller , Bahman Davoudi , Rafael Meza , Anja Slim , Babak Pourbohloul

A second wave of SARS-CoV-2 is unfolding in dozens of countries. However, this second wave manifests itself strongly in new reported cases, but less in death counts compared to the first wave. Over the past three months in Germany, the…

We propose two simple probability models to compute the probability of an influenza pandemic. Under a random walk model the probability that all pandemics between times 0 and 300 occur by time 150 is 1/2. Under a Poisson model with mean…

概率论 · 数学 2008-07-23 Rinaldo B. Schinazi

We analyze the time-series data for the onset of A(H1N1)v influenza pandemic in India during the period June 1- September 30, 2009. Using a variety of statistical fitting procedures, we obtain a robust estimate of the exponential growth…

种群与进化 · 定量生物学 2010-06-07 T. Jesan , Gautam I. Menon , Sitabhra Sinha

COVID-19 has been prevalent worldwide for about 2 years now and has brought unprecedented challenges to our society. Before vaccines were available, the main disease intervention strategies were non-pharmaceutical. Starting December 2020,…

动力系统 · 数学 2022-02-09 Xiaoying Wang , Qing Han , Jude Dzevela Kong

For epidemics control and prevention, timely insights of potential hot spots are invaluable. Alternative to traditional epidemic surveillance, which often lags behind real time by weeks, big data from the Internet provide important…

应用统计 · 统计学 2020-12-25 Shihao Yang , Shaoyang Ning , S. C. Kou

When analysing in vitro data, growth kinetics of influenza strains are often compared by computing their growth rates, which are sometimes used as proxies for fitness. However, analogous to mechanistic epidemic models, the growth rate can…

种群与进化 · 定量生物学 2020-10-26 Ada W. C. Yan , Jie Zhou , Catherine A. A. Beauchemin , Colin A. Russell , Wendy S. Barclay , Steven Riley

Transmission rates are key in understanding the spread of infectious diseases. Using the framework of compartmental models, we introduce a simple method that enables us to reconstruct time series of transmission rates directly from…

定量方法 · 定量生物学 2016-05-06 Alexander Lange

Seasonal influenza epidemics cause consistent, considerable, widespread loss annually in terms of economic burden, morbidity, and mortality. With access to accurate and reliable forecasts of a current or upcoming influenza epidemic's…

种群与进化 · 定量生物学 2016-02-17 Logan C. Brooks , David C. Farrow , Sangwon Hyun , Ryan J. Tibshirani , Roni Rosenfeld

This article reviews quantitative methods to estimate the basic reproduction number of pandemic influenza, a key threshold quantity to help determine the intensity of interventions required to control the disease. Although it is difficult…

种群与进化 · 定量生物学 2009-11-13 Gerardo Chowell , Hiroshi Nishiura