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Graphs drawn in the plane are ubiquitous, arising from data sets through a variety of methods ranging from GIS analysis to image classification to shape analysis. A fundamental problem in this type of data is comparison: given a set of such…

计算几何 · 计算机科学 2022-10-20 Levent Batakci , Abigail Branson , Bryan Castillo , Candace Todd , Erin Wolf Chambers , Elizabeth Munch

Reeb graphs are widely used in a range of fields for the purposes of analyzing and comparing complex spaces via a simpler combinatorial object. Further, they are closely related to extended persistence diagrams, which largely but not…

计算几何 · 计算机科学 2021-07-13 Rehab Alharbi , Erin Wolf Chambers , Elizabeth Munch

Measuring similarity between complex objects is a fundamental task in many scientific fields. When objects are represented as graphs, graph similarity/distance measures offer a powerful framework for quantifying structural resemblance.…

A matrix $S=(s_{ij})\in{\mathbb R}^{n\times n}$ is said to determine a \emph{transitional measure} for a digraph $G$ on $n$ vertices if for all $i,j,k\in\{1,\...,n\},$ the \emph{transition inequality} $s_{ij} s_{jk}\le s_{ik} s_{jj}$ holds…

组合数学 · 数学 2011-09-21 Pavel Chebotarev

In this paper, we present a new metric distance for comparing two large graphs to find similarities and differences between them based on one of the most important graph structural properties, which is Node Adjacency Information, for all…

离散数学 · 计算机科学 2022-06-14 Arefe Alikhani , Farzad Didehvar

We have been interested in graphs and realizing them as Reeb graphs of explicit real algebraic functions. The Reeb graph of a differentiable function is the quotient space of the manifold of the domain, regarded as the space consisting of…

代数几何 · 数学 2025-08-06 Naoki Kitazawa

The notion of local intrinsic dimensionality (LID) is an important advancement in data dimensionality analysis, with applications in data mining, machine learning and similarity search problems. Existing distance-based LID estimators were…

机器学习 · 计算机科学 2023-07-14 Miloš Savić , Vladimir Kurbalija , Miloš Radovanović

Graphs are nowadays ubiquitous in the fields of signal processing and machine learning. As a tool used to express relationships between objects, graphs can be deployed to various ends: I) clustering of vertices, II) semi-supervised…

机器学习 · 计算机科学 2020-07-17 Carlos Lassance , Vincent Gripon , Gonzalo Mateos

It is well-understood that different algorithms, training processes, and corpora produce different word embeddings. However, less is known about the relation between different embedding spaces, i.e. how far different sets of embeddings…

计算与语言 · 计算机科学 2020-05-19 Xuhui Zhou , Zaixiang Zheng , Shujian Huang

In large networks, using the length of shortest paths as the distance measure has shortcomings. A well-studied shortcoming is that extending it to disconnected graphs and directed graphs is controversial. The second shortcoming is that a…

数据结构与算法 · 计算机科学 2018-04-03 Mostafa Haghir Chehreghani , Albert Bifet , Talel Abdessalem

In topological data analysis (TDA), persistence diagrams have been a succesful tool. To compare them, Wasserstein and Bottleneck distances are commonly used. We address the shortcomings of these metrics and show a way to investigate them in…

计算几何 · 计算机科学 2024-09-27 Paweł Dłotko , Niklas Hellmer

We study the probabilistic convergence between the mapper graph and the Reeb graph of a topological space $\mathbb{X}$ equipped with a continuous function $f: \mathbb{X} \rightarrow \mathbb{R}$. We first give a categorification of the…

代数拓扑 · 数学 2020-08-17 Adam Brown , Omer Bobrowski , Elizabeth Munch , Bei Wang

Given the input graph and its label/property, several key problems of graph learning, such as finding interpretable subgraphs, graph denoising and graph compression, can be attributed to the fundamental problem of recognizing a subgraph of…

机器学习 · 计算机科学 2020-10-13 Junchi Yu , Tingyang Xu , Yu Rong , Yatao Bian , Junzhou Huang , Ran He

Among various distance functions for graphs, graph and subgraph edit distances (GED and SED respectively) are two of the most popular and expressive measures. Unfortunately, exact computations for both are NP-hard. To overcome this…

A {\em faithful (unit) distance graph} in $\mathbb{R}^d$ is a graph whose set of vertices is a finite subset of the $d$-dimensional Euclidean space, where two vertices are adjacent if and only if the Euclidean distance between them is…

组合数学 · 数学 2017-12-01 Noga Alon , Andrey Kupavskii

Reeb graphs are simple topological descriptors with applications in many areas like topological data analysis and computational geometry. Despite their prevalence, visualization of Reeb graphs has received less attention. In this paper, we…

计算几何 · 计算机科学 2025-05-20 Erin Chambers , Brittany Terese Fasy , Erfan Hosseini Sereshgi , Maarten Löffler

Graphs are versatile tools for representing structured data. As a result, a variety of machine learning methods have been studied for graph data analysis. Although many such learning methods depend on the measurement of differences between…

机器学习 · 统计学 2021-06-18 Tomoki Yoshida , Ichiro Takeuchi , Masayuki Karasuyama

We present path2vec, a new approach for learning graph embeddings that relies on structural measures of pairwise node similarities. The model learns representations for nodes in a dense space that approximate a given user-defined graph…

计算与语言 · 计算机科学 2019-04-15 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko

In this article, we study the question of the statistical convergence of the 1-dimensional Mapper to its continuous analogue, the Reeb graph. We show that the Mapper is an optimal estimator of the Reeb graph, which gives, as a byproduct, a…

计算几何 · 计算机科学 2017-11-10 Mathieu Carrière , Bertrand Michel , Steve Oudot

This is a note on the graphs of two smooth real-valued functions in the plane with no intersection and the natural map onto the region surrounded by them with the canonical projection to the line composed, yielding its Reeb space. The Reeb…

一般拓扑 · 数学 2026-03-24 Naoki Kitazawa