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The paradigm that the primary amino acid sequence prescribes structure and thus function has for a long time been central to the understanding of protein science. Though the theory is supported by the behaviour of most structured proteins,…

生物物理 · 物理学 2022-12-19 Rickie Xian , Sarah Rauscher

A method of the mid-IR-laser microscopy has been proposed for the investigation of the large-scale electrically and recombination active defects in semiconductors and non-destructive inspection of semiconductor materials and structures in…

材料科学 · 物理学 2011-05-17 V. P. Kalinushkin , V. A. Yuryev , O. V. Astafiev

We argue that a finite iteration of any surface fractal can be composed of mass-fractal iterations of the same fractal dimension. Within this assertion, the scattering amplitude of surface fractal is shown to be a sum of the amplitudes of…

统计力学 · 物理学 2017-06-05 A. Yu. Cherny , E. M. Anitas , V. A. Osipov , A. I. Kuklin

Distributed scatterers in InSAR (DS-InSAR) processing are essential for retrieving surface deformation in areas lacking strong point targets. Conventional workflows typically involve selecting statistically homogeneous pixels based on…

应用统计 · 统计学 2025-09-17 Shuyi Yao , Alejandro C. Frery , Timo Balz

In the problem of spotlight mode airborne synthetic aperture radar (SAR) image formation, it is well-known that data collected over a wide azimuthal angle violate the isotropic scattering property typically assumed. Many techniques have…

图像与视频处理 · 电气工程与系统科学 2023-04-12 Victor Churchill , Anne Gelb

In this paper, we study a sequential decision-making problem, called Adaptive Sampling for Discovery (ASD). Starting with a large unlabeled dataset, algorithms for ASD adaptively label the points with the goal to maximize the sum of…

机器学习 · 统计学 2023-01-04 Ziping Xu , Eunjae Shim , Ambuj Tewari , Paul Zimmerman

Short-range interactions and long-range contacts drive the 3D folding of structured proteins. The proteins' structure has a direct impact on their biological function. However, nearly 40% of the eukaryotes proteome is composed of…

This paper reviews the state of art technology of laser induced breakdown spectroscopy (LIBS). Research on LIBS is gaining momentum in the field of instrumentation and data analysis technique due to its wide application in various field…

光学 · 物理学 2014-07-02 V. N. Rai

The small-angle scattering (SAS) from the Cantor surface fractal on the plane and Koch snowflake is considered. We develop the construction algorithm for the Koch snowflake, which makes possible the recurrence relation for the scattering…

统计力学 · 物理学 2017-03-10 A. Yu. Cherny , E. M. Anitas , V. A. Osipov , A. I. Kuklin

Proteins are biomolecules of life. They fold into a great variety of three-dimensional (3D) shapes. Underlying these folding patterns are many recurrent structural fragments or building blocks (analogous to `LEGO bricks'). This paper…

定量方法 · 定量生物学 2013-10-08 Arun S. Konagurthu , Arthur M. Lesk , David Abramson , Peter J. Stuckey , Lloyd Allison

Whether it be due to rapid rotation or binary interactions, deviations from spherical symmetry are common in massive stars. These deviations from spherical symmetry are known to cause non-uniform distributions of various parameters across…

太阳与恒星天体物理 · 物理学 2022-08-03 Michael Abdul-Masih

Dynamic Light Scattering (DLS) and Small-Angle Neutron Scattering (SANS) are two key tools with which to probe the dynamic and static structure factor, respectively, in soft matter. Usually DLS and SANS measurements are performed…

Using the perturbation-response scanning (PRS) technique, we study a set of 23 proteins that display a variety of conformational motions upon ligand binding (e.g. shear, hinge, allosteric). In most cases, PRS determines residues that may be…

生物大分子 · 定量生物学 2015-05-18 C Atilgan , Z N Gerek , S B Ozkan , A R Atilgan

The elastic scattering process $\Lambda p\to\Lambda p$ offers insights on multiple problems in nuclear physics. $\mathrm{SU}(3)_F$ symmetry implies a close agreement between the $\Lambda p$ and $pp$ scattering cross sections. The $\Lambda…

核实验 · 物理学 2019-09-04 John W. Price

The dynamics of many macromolecular machines is characterized by chemically-mediated structural changes that achieve large scale functional deployment through local rearrangements of constitutive protein sub-units. Motivated by recent high…

软凝聚态物质 · 物理学 2024-07-16 Noah Toyonaga , L Mahadevan

Protein design has the potential to revolutionize biotechnology and medicine. While most efforts have focused on proteins with well-defined structures, increased recognition of the functional significance of intrinsically disordered…

生物大分子 · 定量生物学 2025-09-17 Giulio Tesei , Francesco Pesce , Kresten Lindorff-Larsen

We report simulation studies of 33 single intrinsically disordered proteins (IDPs) using coarse-grained (CG) bead-spring models where interactions among different amino acids are introduced through a hydropathy matrix and additional…

软凝聚态物质 · 物理学 2023-12-07 Swarnadeep Seth , Brandon Stine , Aniket Bhattacharya

Proteins are vital biological molecules found in every living organism, and their function is determined by what shape they fold into. Peptides are essentially subsets of proteins, and therefore ideal as model systems for protein folding.…

生物物理 · 物理学 2025-09-11 Åke Andersson , Vitali Zhaunerchyk

The structure of proteins is essential for its function. The determination of protein structures is possible by experimental or predicted by computational methods, but also a combination of both approaches is possible. Here, first an…

其他定量生物学 · 定量生物学 2020-03-03 Gerhard Mayer

Intrinsically disordered proteins (IDPs) are important for biological functions. In contrast to folded proteins, molecular recognition among certain IDPs is "fuzzy" in that their binding and/or phase separation are stochastically governed…

生物大分子 · 定量生物学 2020-08-10 Alan N. Amin , Yi-Hsuan Lin , Suman Das , Hue Sun Chan