相关论文: On the phylogeny graphs of degree-bounded digraphs

The maximum number of vertices in a graph of maximum degree $\Delta\ge 3$ and fixed diameter $k\ge 2$ is upper bounded by $(1+o(1))(\Delta-1)^{k}$. If we restrict our graphs to certain classes, better upper bounds are known. For instance,…

Phylogenetic trees and networks are leaf-labelled graphs used to model evolution. Display graphs are created by identifying common leaf labels in two or more phylogenetic trees or networks. The treewidth of such graphs is bounded as a…

A $k$-colouring (not necessarily proper) of vertices of a graph is called {\it acyclic}, if for every pair of distinct colours $i$ and $j$ the subgraph induced by the edges whose endpoints have colours $i$ and $j$ is acyclic. In the paper…

In evolutionary biology, phylogenetic networks are graphs that provide a flexible framework for representing complex evolutionary histories that involve reticulate evolutionary events. Recently phylogenetic studies have started to focus on…

Network motifs are characteristic patterns which occur in the networks essentially more frequently than the other patterns. For five motifs found in S. Itzkovitz, U. Alon, Phys. Rev.~E, 2005, 71, 026117-1, hierarchical random graphs are…

A graph property is said to be elusive ( evasive) if every algorithm testing this property by asking questions of the form "is there an edge between vertices x and y" requires, in the worst case, to ask about all pairs of vertices. The…

We view hyper-graphs as incidence graphs, i.e. bipartite graphs with a set of nodes representing vertices and a set of nodes representing hyper-edges, with two nodes being adjacent if the corresponding vertex belongs to the corresponding…

Euler graphs with only one (two) type(s) of cycles under (mod 4) operation were studied in Part-I(II). Here we consider the class of Euler graphs with only three types of cycles under (mod 4). This gives rise to four cases viz., graphs…

Mixed graphs can be seen as digraphs that have both arcs and edges (or digons, that is, two opposite arcs). In this paper, we consider the case in which such graphs are Cayley graphs of Abelian groups. These groups can be constructed by…

We investigate the joint distribution of the vertex degrees in three models of random bipartite graphs. Namely, we can choose each edge with a specified probability, choose a specified number of edges, or specify the vertex degrees in one…

Understanding how the cycles of a graph or digraph behave in general has always been an important point of graph theory. In this paper, we study the question of finding a set of $k$ vertex-disjoint cycles (resp. directed cycles) of distinct…

Let $H=(V,F)$ be a simple hypergraph without loops. $H$ is called linear if $|f\cap g|\le 1$ for any $f,g\in F$ with $f\not=g$. The $2$-section of $H$, denoted by $[H]_2$, is a graph with $V([H]_2)=V$ and for any $ u,v\in V([H]_2)$, $uv\in…

The well-known 1-2-3 Conjecture asserts that the edges of every graph without an isolated edge can be weighted with $1$, $2$ and $3$ so that adjacent vertices receive distinct weighted degrees. This is open in general. We prove that every…

In mathematical phylogenetics, evolutionary relationships are often represented by trees and networks. The latter are typically used whenever the relationships cannot be adequately described by a tree, which happens when so-called…

In this paper we consider bi-Cohen-Macaulay graphs, and give a complete classification of such graphs in the case they are bipartite or chordal. General bi-Cohen-Macaulay graphs are classified up to separation. The inseparable…

Inspired by the work of Backelin on non-commutative correspondences to Macaulay's theorem of the growth of the Hilbert series of affine algebras, we study embedding dimension dependant versions of his degree 2 to degree 3 result. In…

Directed acyclic graph (DAG) models, also called Bayesian networks, impose conditional independence constraints on a multivariate probability distribution, and are widely used in probabilistic reasoning, machine learning and causal…

We study characteristics which might distinguish two-graphs by introducing different numerical measures on the collection of graphs on $n$ vertices. Two conjectures are stated, one using these numerical measures and the other using the deck…

Bidirected graphs generalize directed and undirected graphs in that edges are oriented locally at every node. The natural notion of the degree of a node that takes into account (local) orientations is that of net-degree. In this paper, we…

There are a variety of existing conditions for a degree sequence to be graphic. When a degree sequence satisfies any of these conditions, there exists a graph that realizes the sequence. We formulate several novel sufficient graphicality…