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How can we design neural networks that allow for stable universal approximation of maps between topologically interesting manifolds? The answer is with a coordinate projection. Neural networks based on topological data analysis (TDA) use…

机器学习 · 计算机科学 2022-10-04 Michael Puthawala , Matti Lassas , Ivan Dokmanic , Pekka Pankka , Maarten de Hoop

Graph neural network (GNN)'s success in graph classification is closely related to the Weisfeiler-Lehman (1-WL) algorithm. By iteratively aggregating neighboring node features to a center node, both 1-WL and GNN obtain a node representation…

机器学习 · 计算机科学 2021-10-27 Muhan Zhang , Pan Li

The Vietoris-Rips filtration for an $n$-point metric space is a sequence of large simplicial complexes adding a topological structure to the otherwise disconnected space. The persistent homology is a key tool in topological data analysis…

计算几何 · 计算机科学 2017-09-19 Vitaliy Kurlin

Graph Neural Networks (GNNs) have proven to be useful for many different practical applications. However, many existing GNN models have implicitly assumed homophily among the nodes connected in the graph, and therefore have largely…

机器学习 · 计算机科学 2021-06-16 Jiong Zhu , Ryan A. Rossi , Anup Rao , Tung Mai , Nedim Lipka , Nesreen K. Ahmed , Danai Koutra

Topological drawings are natural representations of graphs in the plane, where vertices are represented by points, and edges by curves connecting the points. Topological drawings of complete graphs and of complete bipartite graphs have been…

计算几何 · 计算机科学 2017-02-10 Jean Cardinal , Stefan Felsner

Interest has been rising lately towards methods representing data in non-Euclidean spaces, e.g. hyperbolic or spherical, that provide specific inductive biases useful for certain real-world data properties, e.g. scale-free, hierarchical or…

机器学习 · 计算机科学 2020-05-20 Gregor Bachmann , Gary Bécigneul , Octavian-Eugen Ganea

Graph transformers typically embed every node in a single Euclidean space, blurring heterogeneous topologies. We prepend a lightweight Riemannian mixture-of-experts layer that routes each node to various kinds of manifold, mixture of…

机器学习 · 计算机科学 2025-07-11 Ankit Jyothish , Ali Jannesari

In traditional Graph Neural Networks (GNNs), the assumption of a fixed embedding manifold often limits their adaptability to diverse graph geometries. Recently, Hamiltonian system-inspired GNNs have been proposed to address the dynamic…

机器学习 · 计算机科学 2024-07-25 Jiaxu Liu , Xinping Yi , Tianle Zhang , Xiaowei Huang

Graph convolution networks (GCNs) have been enormously successful in learning representations over several graph-based machine learning tasks. Specific to learning rich node representations, most of the methods have solely relied on the…

机器学习 · 计算机科学 2022-11-03 Ashish Tiwari , Sresth Tosniwal , Shanmuganathan Raman

Graphs have become a crucial way to represent large, complex and often temporal datasets across a wide range of scientific disciplines. However, when graphs are used as input to machine learning models, this rich temporal information is…

Graph neural networks (GNNs) provide state-of-the-art results in a wide variety of tasks which typically involve predicting features at the vertices of a graph. They are built from layers of graph convolutions which serve as a powerful…

机器学习 · 统计学 2024-11-08 Mauricio Velasco , Kaiying O'Hare , Bernardo Rychtenberg , Soledad Villar

This paper characterizes the graphical properties of an optimal topology with minimal Laplacian energy under the constraint of fixed numbers of vertices and edges, and devises an algorithm to construct such connected optimal graphs. These…

最优化与控制 · 数学 2024-03-26 Susie Lu , Ji Liu

We propose a novel method for topological analysis of unweighted graphs which is based on \textit{persistent homology}. The proposed method maps the input graph to a complete weighted graph where the weighting function maps each edge to a…

代数拓扑 · 数学 2020-07-31 Padraig Corcoran

This work introduces the Topological CNN (TCNN), which encompasses several topologically defined convolutional methods. Manifolds with important relationships to the natural image space are used to parameterize image filters which are used…

机器学习 · 计算机科学 2021-03-05 Ephy R. Love , Benjamin Filippenko , Vasileios Maroulas , Gunnar Carlsson

Topological correctness plays a critical role in many image segmentation tasks, yet most networks are trained using pixel-wise loss functions, such as Dice, neglecting topological accuracy. Existing topology-aware methods often lack robust…

计算机视觉与模式识别 · 计算机科学 2025-04-21 Laurin Lux , Alexander H. Berger , Alexander Weers , Nico Stucki , Daniel Rueckert , Ulrich Bauer , Johannes C. Paetzold

Subgraph isomorphism, also known as subgraph matching, is typically regarded as an NP-complete problem. This complexity is further compounded in practical applications where edge weights are real-valued and may be affected by measurement…

机器学习 · 统计学 2025-06-24 Arpan Kusari , Wenbo Sun

Nearest neighbour graphs are widely used to capture the geometry or topology of a dataset. One of the most common strategies to construct such a graph is based on selecting a fixed number k of nearest neighbours (kNN) for each point.…

机器学习 · 统计学 2022-08-02 Tetsuya Matsumoto , Stephen Zhang , Geoffrey Schiebinger

Recently, graph neural networks (GNNs) have become an important and active research direction in deep learning. It is worth noting that most of the existing GNN-based methods learn graph representations within the Euclidean vector space.…

机器学习 · 计算机科学 2021-10-08 Dai Quoc Nguyen , Tu Dinh Nguyen , Dinh Phung

In this work we use the persistent homology method, a technique in topological data analysis (TDA), to extract essential topological features from the data space and combine them with deep learning features for classification tasks. In TDA,…

计算机视觉与模式识别 · 计算机科学 2023-11-14 Mariana Dória Prata Lima , Gilson Antonio Giraldi , Gastão Florêncio Miranda Junior

Graph Neural Networks (GNNs) effectively learn from relational data by leveraging graph symmetries. However, many real-world systems -- such as biological or social networks -- feature multi-way interactions that GNNs fail to capture.…

机器学习 · 计算机科学 2025-11-21 Mathilde Papillon , Guillermo Bernárdez , Claudio Battiloro , Nina Miolane