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Ben-Ari and Schinazi (2016) introduced a stochastic model to study `virus-like evolving population with high mutation rate'. This model is a birth and death model with an individual at birth being either a mutant with a random fitness…

概率论 · 数学 2020-01-03 Rahul Roy , Hideki Tanemura

The dynamics of populations is rich, taking into account that both, the individual's actions and the population's fitness are coupled. The way in which an individual chooses a strategy depends off course on the interaction with other…

生物物理 · 物理学 2007-07-20 Juan G. Diaz Ochoa

We investigate the process of fixation of advantageous mutations in an asexual population. We assume that the effect of each beneficial mutation is exponentially distributed with mean value $\omega_{med}=1/\beta$. The model also considers…

种群与进化 · 定量生物学 2009-11-10 Viviane M. de Oliveira , Paulo R. A. Campos

Darwinian evolution can be modeled in general terms as a flow in the space of fitness (i.e. reproductive rate) distributions. In the diffusion approximation, Tsimring et al. have showed that this flow admits "fitness wave" solutions:…

种群与进化 · 定量生物学 2017-01-30 Matteo Smerlak , Ahmed Youssef

Evolution is the process of optimal adaptation of biological populations to their living environments. This is expressed via the concept of fitness, defined as relative reproductive success. However, it has been pointed out that this…

种群与进化 · 定量生物学 2025-04-17 Luís MA Bettencourt , Brandon J Grandison , Jordan T Kemp

Modern developments in population dynamics emphasize the role of the turnover of individuals. In the new approaches stable population size is a dynamic equilibrium between different mortality and fecundity factors instead of an arbitrary…

种群与进化 · 定量生物学 2014-03-05 Krzysztof Argasinski , Mark Broom

We consider the evolution of an asexually reproducing population in an uncorrelated random fitness landscape in the limit of infinite genome size, which implies that each mutation generates a new fitness value drawn from a probability…

种群与进化 · 定量生物学 2009-11-13 Su-Chan Park , Joachim Krug

Resource are often not uniformly distributed within a population. Spatial variations of concentration of a resource, change the fitness of competing strategies locally. The notion of fitness varying with respect to both genotype and…

种群与进化 · 定量生物学 2022-04-08 Hossein Nemati , Mohammad Reza Ejtehadi , Kamran Kaveh

Adaptation often involves the acquisition of a large number of genomic changes which arise as mutations in single individuals. In asexual populations, combinations of mutations can fix only when they arise in the same lineage, but for…

种群与进化 · 定量生物学 2011-08-18 Richard A. Neher , Boris I. Shraiman , Daniel S. Fisher

We discuss stochastic dynamics of populations of individuals playing games. Our models possess two evolutionarily stable strategies: an efficient one, where a population is in a state with the maximal payoff (fitness) and a risk-dominant…

种群与进化 · 定量生物学 2007-05-23 Jacek Miekisz

The adaptive evolution of large asexual populations is generally characterized by competition between clones carrying different beneficial mutations. This interference phenomenon slows down the adaptation speed and makes the theoretical…

种群与进化 · 定量生物学 2012-12-20 Maria Rita Fumagalli , Matteo Osella , Philippe Thomen , Francois Heslot , Marco Cosentino Lagomarsino

Traditionally evolution is seen as a process where from a pool of possible variations of a population (e.g. biological species or industrial goods) a few variations get selected which survive and proliferate, whereas the others vanish.…

种群与进化 · 定量生物学 2008-09-25 Rudolf Hanel , Stefan Thurner

We consider a population of N individuals, whose dynamics through time is represented by a biparental Moran model with two types: an advantaged type and a disadvantaged type. The advantage is due to a mutation, transmitted in a Mendelian…

概率论 · 数学 2024-05-15 Camille Coron , Yves Le Jan

We show how concepts from statistical physics, such as order parameter, thermodynamic limit, and quantum phase transition, translate into biological concepts in mutation-selection models for sequence evolution and can be used there. The…

统计力学 · 物理学 2007-05-23 Joachim Hermisson , Oliver Redner , Holger Wagner , Ellen Baake

Stochastic models of sequential mutation acquisition are widely used to quantify cancer and bacterial evolution. Across manifold scenarios, recurrent research questions are: how many cells are there with $n$ alterations, and how long will…

种群与进化 · 定量生物学 2023-07-07 Michael D. Nicholson , David Cheek , Tibor Antal

We study a discrete-time stochastic process that can also be interpreted as a model for a viral evolution. A distinguishing feature of our process is power-law tails due to dynamics that resembles preferential attachment models. In the…

概率论 · 数学 2020-06-17 Iddo Ben-Ari , Carter Bedsole , Grace O'Neil

One essential ingredient of evolutionary theory is the concept of fitness as a measure for a species' success in its living conditions. Here, we quantify the effect of environmental fluctuations onto fitness by analytical calculations on a…

种群与进化 · 定量生物学 2015-05-19 Anna Melbinger , Massimo Vergassola

In evolutionary algorithms, the fitness of a population increases with time by mutating and recombining individuals and by a biased selection of more fit individuals. The right selection pressure is critical in ensuring sufficient…

神经与进化计算 · 计算机科学 2007-05-23 Marcus Hutter , Shane Legg

We study a mathematical model describing the growth process of a population structured by age and a phenotypical trait, subject to aging, competition between individuals and rare mutations. Our goals are to describe the asymptotic behaviour…

偏微分方程分析 · 数学 2020-04-17 Samuel Nordmann , Benoît Perthame , Cécile Taing

This study elaborates some examples of a simple evolutionary stochastic rate process where the population rate of change depends on the distribution of properties--so different cohorts change at different rates. We investigate the effect on…

种群与进化 · 定量生物学 2010-01-26 C. T. J. Dodson