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相关论文: Poisson-Nernst-Planck-Fermi Theory for Ion Channel…

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Numerical methods are proposed for an advanced Poisson-Nernst-Planck-Fermi (PNPF) model for studying ion transport through biological ion channels. PNPF contains many more correlations than most models and simulations of channels, because…

生物大分子 · 定量生物学 2015-06-22 Jinn-Liang Liu , Bob Eisenberg

We have developed a molecular mean-field theory -- fourth-order Poisson-Nernst-Planck-Bikerman theory -- for modeling ionic and water flows in biological ion channels by treating ions and water molecules of any volume and shape with…

软凝聚态物质 · 物理学 2020-05-18 Jinn-Liang Liu , Bob Eisenberg

This is an early but comprehensive review of the PNP Poisson Nernst Planck theory of ion channels. Extensive reference is made to the earlier literature. The starting place for this theory of open channels is a theory of electrodiffusion…

生物大分子 · 定量生物学 2010-09-16 Bob Eisenberg

The Poisson-Nernst-Planck-Bikermann (PNPB) model, in which the ions and water molecules are treated as different species with non-uniform sizes and valences with interstitial voids, can describe the steric and correlation effects in ionic…

数学物理 · 物理学 2022-01-06 Jian-Guo Liu , Yijia Tang , Yu Zhao

Ion transport through narrow channels is described by the coupled Poisson--Nernst--Planck--Stokes equations (PNPS) on a continuum scale. However, direct numerical simulations in two or three dimensions of boundary value problems for small…

偏微分方程分析 · 数学 2026-03-10 Christine Keller , Andreas Münch , Barbara Wagner

The flow of ions through permeable channels causes voltage drop in physiological nanodomains such as synapses, dendrites and dendritic spines, and other protrusions. How the voltage changes around channels in these nanodomains has remained…

软凝聚态物质 · 物理学 2025-01-10 Frédéric Paquin-Lefebvre , David Holcman

Effective Poisson-Nernst-Planck (PNP) equations are derived for macroscopic ion transport in charged porous media under periodic fluid flow by an asymptotic multi-scale expansion with drift. The microscopic setting is a two-component…

数学物理 · 物理学 2014-07-16 Markus Schmuck , Martin Z. Bazant

The molecular mechanism of ion channel gating and substrate modulation is elusive for many voltage gated ion channels, such as eukaryotic sodium ones. The understanding of channel functions is a pressing issue in molecular biophysics and…

生物大分子 · 定量生物学 2016-11-15 Duan Chen , Guowei Wei

A modified Poisson-Nernst-Planck system in a bounded domain with mixed Dirichlet-Neumann boundary conditions is analyzed. It describes the concentrations of ions immersed in a polar solvent and the correlated electric potential due to the…

偏微分方程分析 · 数学 2023-05-25 Ansgar Jüngel , Annamaria Massimini

We consider the Poisson-Nernst-Planck system which is well-accepted for describing dilute electrolytes as well as transport of charged species in homogeneous environments. Here, we study these equations in porous media whose electric…

数学物理 · 物理学 2013-02-26 Markus Schmuck

A macroscopic model to describe the dynamics of ion transport in ion channels is the Poisson-Nernst-Planck(PNP) equations. In this paper, we develop a finite-difference method for solving PNP equations, which is second-order accurate in…

数值分析 · 数学 2013-03-18 Allen Flavell , Michael Machen , Bob Eisenberg , Chun Liu , Xiaofan Li

The Poisson-Nernst-Planck system of equations used to model ionic transport is interpreted as a gradient flow for the Wasserstein distance and a free energy in the space of probability measures with finite second moment. A variational…

偏微分方程分析 · 数学 2015-09-08 David Kinderlehrer , Léonard Monsaingeon , Xiang Xu

In order to describe the dynamics of crowded ions (charged particles), we use an energetic variation approach to derive a modified Poisson-Nernst-Planck (PNP) system which includes an extra dissipation due to the effective velocity…

数学物理 · 物理学 2014-08-01 Chia-Yu Hsieh , YunKyong Hyon , Hijin Lee , Tai-Chia Lin , Chun Liu

We present a nonlocal electrostatic formulation of nonuniform ions and water molecules with interstitial voids that uses a Fermi-like distribution to account for steric and correlation effects in electrolyte solutions. The formulation is…

软凝聚态物质 · 物理学 2017-03-27 Jinn-Liang Liu , Dexuan Xie , Bob Eisenberg

In traditional hydrodynamic theories for ionic fluids, conservation of the mass and linear momentum is not properly taken care of. In this paper, we develop hydrodynamic theories for a viscous, ionic fluid of $N$ ionic species enforcing…

流体动力学 · 物理学 2018-11-08 Xiaogang Yang , Yuezheng Gong , Jun Li , Robert S. Eisenberg , Qi Wang

The Poisson-Nernst-Planck (PNP) equations are fundamental for modeling ion transport in electrochemical systems, capturing the intricate interplay of concentration gradients, electric fields, and ion fluxes essential for applications such…

化学物理 · 物理学 2025-01-13 Yitao He , Dan Zhao

The main goal of this work is to examine the qualitative effect of ion sizes via a steady-state boundary value problem. We study a one-dimensional version of a Poisson-Nernst-Planck system with a local hard-sphere potential model for ionic…

数学物理 · 物理学 2022-03-18 Weishi Liu , Hamid Mofidi

In this research, we explore how permanent charges affect the movement of ionic currents through ion channels. We use a quasi-one-dimensional classical Poisson-Nernst-Planck (PNP) model to study two types of ions, one positively charged and…

动力系统 · 数学 2023-12-29 Hamid Mofidi

This study investigates the flux ratios of ionic flows using Poisson-Nernst-Planck (PNP) models. The flux ratio measures the effect of permanent charge on the ion fluxes and can exhibit bifurcation, where a small parameter change causes a…

动力系统 · 数学 2023-11-07 Hamid Mofidi

The Poisson--Nernst--Planck (PNP) equations have been widely applied to describe ionic transport in ion channels, nanofluidic devices, and many electrochemical systems. Despite their wide applications, the PNP equations fail in predicting…

统计力学 · 物理学 2018-01-03 Farjana Siddiqua , Zhongming Wang , Shenggao Zhou
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