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Models of population growth and extinction are an increasingly popular subject of study. However, consequences of stochasticity and noise in shaping distributions and outcomes are not sufficiently explored. Here we consider a distributed…

统计力学 · 物理学 2020-11-11 Bertrand Ottino-Löffler , Mehran Kardar

For a one-locus haploid infinite population with discrete generations, the celebrated Kingman's model describes the evolution of fitness distributions under the competition of selection and mutation, with a constant mutation probability.…

概率论 · 数学 2021-06-01 Linglong Yuan

Predicting fitness of biologically-active populations, communities or systems in fluctuating environments is a long-standing challenge. Phenotypic plasticity and bet-hedging strategy, two key evolutionary traits living systems harness to…

种群与进化 · 定量生物学 2024-10-24 Sumana Bhattacharyya , Uttam Singh , Anupam Sengupta

Muller's ratchet is a paradigmatic model for the accumulation of deleterious mutations in a population of finite size. A click of the ratchet occurs when all individuals with the least number of deleterious mutations are lost irreversibly…

种群与进化 · 定量生物学 2013-11-20 Jakob J. Metzger , Stephan Eule

We considered a {multi-block} molecular model of biological evolution, in which fitness is a function of the mean types of alleles located at different parts (blocks) of the genome. We formulated an infinite population model with selection…

种群与进化 · 定量生物学 2015-06-12 David B. Saakian , Zara Kirakosyan , Chin-Kun Hu

Motivated by tumor growth and spatial population genetics, we study the interplay between evolutionary and spatial dynamics at the surfaces of three-dimensional, spherical range expansions. We consider range expansion radii that grow with…

种群与进化 · 定量生物学 2015-06-02 Maxim O. Lavrentovich , David R. Nelson

We investigate the evolutionary dynamics of a finite population of sequences adapting to NK fitness landscapes. We find that, unlike in the case of an infinite population, the average fitness in a finite population is maximized at a small…

生物物理 · 物理学 2009-11-07 Paulo R. A. Campos , Christoph Adami , Claus O. Wilke

Population genetics struggles to model extinction; standard models track the relative rather than absolute fitness of genotypes, while the exceptions describe only the short-term transition from imminent doom to evolutionary rescue. But…

种群与进化 · 定量生物学 2017-02-20 Jason Bertram , Kevin Gomez , Joanna Masel

We consider a trait-structured population subject to mutation, birth and competition of logistic type, where the number of coexisting types may fluctuate. Applying a limit of rare mutations to this population while keeping the population…

概率论 · 数学 2011-12-05 Nicolas Champagnat , Amaury Lambert

Environmental fluctuations can create population-depleted areas and even extinct areas for the population. This effect is more severe in the presence of the Allee effect (decreasing growth rate at low population densities). Dispersal inside…

种群与进化 · 定量生物学 2022-02-23 Rodrigo Crespo-Miguel , Javier Jarillo , Francisco J. Cao-García

We consider a fitness-structured population model with competition and migration between nearest neighbors. Under a combination of large population and rare migration limits we are particularly interested in the asymptotic behavior of the…

概率论 · 数学 2012-07-20 Anton Bovier , Shi-Dong Wang

Boundary-catalytic branching processes describe a broad class of natural phenomena where the population of diffusing particles grows due to their spontaneous binary branching (e.g., division, fission or splitting) on a catalytic boundary…

统计力学 · 物理学 2026-03-05 Denis S. Grebenkov , Yilin Ye

We investigate the competition between barrier slowing down and proliferation induced superdiffusion in a model of population dynamics in a random force field. Numerical results in $d=1$ suggest that a new intermediate diffusion behaviour…

凝聚态物理 · 物理学 2007-05-23 Irene Giardina , Jean-Philippe Bouchaud , Marc Mezard

We investigate the exploration of rugged fitness landscapes by spatially structured populations with demes on the nodes of a graph, connected by migrations. In the rare migration regime, we find that finite structures can adapt more…

种群与进化 · 定量生物学 2025-02-07 Richard Servajean , Arthur Alexandre , Anne-Florence Bitbol

We study the evolution of asexual microorganisms with small mutation rate in fluctuating environments, and develop techniques that allow us to expand the formal solution of the evolution equations to first order in the mutation rate. Our…

生物物理 · 物理学 2009-11-06 Claus Wilke , Christopher Ronnewinkel

A phase diagram for a one dimensional fiber bundle model is constructed with a continuous variation in two parameters guiding dynamics of the model: strength of disorder and system size. We monitor the successive events of fiber rupture in…

统计力学 · 物理学 2021-12-03 Subhadeep Roy

Organisms that exploit different environments may experience a stochastic delay in adjusting their fitness when they switch habitats. We study two species whose fitness is determined by the species composition of the local environment, as…

生物物理 · 物理学 2019-02-04 Marianne Bauer , Erwin Frey

This Letter studies the quasispecies dynamics of a population capable of genetic repair evolving on a time-dependent fitness landscape. We develop a model that considers an asexual population of single-stranded, conservatively replicating…

种群与进化 · 定量生物学 2009-11-13 Pavel Gorodetsky , Emmanuel Tannenbaum

In evolution theory the concept of a fitness landscape has played an important role, evolution itself being portrayed as a hill-climbing process on a rugged landscape. In this article it is shown that in general, in the presence of other…

适应与自组织系统 · 物理学 2016-11-17 C. R. Stephens

A simulation model of a population having internal (genetic) structure is presented. The population is subject to selection pressure coming from the environment which is the same in the whole system but changes in time. Reproduction has a…

适应与自组织系统 · 物理学 2012-08-31 Andrzej Pekalski , Marcel Ausloos