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Intra-tumour phenotypic heterogeneity limits accuracy of clinical diagnostics and hampers the efficiency of anti-cancer therapies. Dealing with this cellular heterogeneity requires adequate understanding of its sources, which is extremely…

In this work, we derive a reliable and efficient residual-typed error estimator for the finite element approximation of a 2d cathodic protection problem governed by a steady-state diffusion equation with a nonlinear boundary condition. We…

数值分析 · 数学 2019-08-21 Guanglian Li , Yifeng Xu

In this study, we model avascular tumour growth in epithelial tissue. This can help us to get a macroscopic view of the interaction between the tumour with its surrounding microenvironment and the physical changes within the tumour…

组织与器官 · 定量生物学 2019-05-15 Sounak Sadhukhan , S. K. Basu

A new class of implicit-explicit (IMEX) methods combined with a p-adaptive mixed finite element formulation is proposed to simulate the diffusion of reacting species. Hierarchical polynomial functions are used to construct an…

A design optimization framework for process parameters of additive manufacturing based on finite element simulation is proposed. The finite element method uses a coupled thermomechanical model developed for fused deposition modeling from…

数值分析 · 数学 2025-01-29 Jingyi Wang , Panayiotis Papadopoulos

The investigation of tumor invasion and metastasis dynamics is crucial for advancements in cancer biology and treatment. Many mathematical models have been developed to study the invasion of host tissue by tumor cells. In this paper, we…

数值分析 · 数学 2024-07-09 Boyi Hu , Zhongjian Wang , Jack Xin , Zhiwen Zhang

A systematic understanding of the evolution and growth dynamics of invasive solid tumors in response to different chemotherapy strategies is crucial for the development of individually optimized oncotherapy. Here, we develop a hybrid…

组织与器官 · 定量生物学 2020-07-01 Hang Xie , Yang Jiao , Qihui Fan , Miaomiao Hai , Jiaen Yang , Zhijian Hu , Yue Yang , Jianwei Shuai , Guo Chen , Ruchuan Liu , Liyu Liu

Tumor growth beyond a critical size relies on the development of a functional vascular network, which ensures adequate oxygen and nutrient supply. In this work, we present a modeling framework based on an optimization-based 3D-1D coupling…

数值分析 · 数学 2026-04-01 Chiara Giverso , Denise Grappein , Stefano Scialò

Intratumour phenotypic heterogeneity is nowadays understood to play a critical role in disease progression and treatment failure. Accordingly, there has been increasing interest in the development of mathematical models capable of capturing…

种群与进化 · 定量生物学 2025-04-10 Chiara Villa , Philip K Maini , Alexander P Browning , Adrianne L Jenner , Sara Hamis , Tyler Cassidy

We consider a shape optimization based method for finding the best interpolation data in the compression of images with noise. The aim is to reconstruct missing regions by means of minimizing a data fitting term in an $L^p$-norm between…

偏微分方程分析 · 数学 2024-10-11 Zakaria Belhachmi , Thomas Jacumin

Starting from a mesoscopic description of cell migration and intraspecific interactions we obtain by upscaling an effective reaction-difusion-taxis equation for the cell population density involving spatial nonlocalities in the source term…

偏微分方程分析 · 数学 2023-07-31 Maria Eckardt , Christina Surulescu

In this paper, we consider the problem of jointly performing online parameter estimation and optimal sensor placement for a partially observed infinite dimensional linear diffusion process. We present a novel solution to this problem in the…

最优化与控制 · 数学 2022-01-12 Louis Sharrock , Nikolas Kantas

In this work, we present an adjoint-based method for discovering the underlying governing partial differential equations (PDEs) given data. The idea is to consider a parameterized PDE in a general form and formulate a PDE-constrained…

最优化与控制 · 数学 2025-09-23 Mohsen Sadr , Tony Tohme , Kamal Youcef-Toumi

In this article we study adaptive finite element methods (AFEM) with inexact solvers for a class of semilinear elliptic interface problems. We are particularly interested in nonlinear problems with discontinuous diffusion coefficients, such…

数值分析 · 数学 2016-08-24 Michael Holst , Ryan Szypowski , Yunrong Zhu

The estimation of distributed parameters in partial differential equations (PDE) from measures of the solution of the PDE may lead to under-determination problems. The choice of a parameterization is a usual way of adding a-priori…

数值分析 · 数学 2008-01-16 Hend Ben Ameur , François Clément , Pierre Weis , Guy Chavent

We develop a cut finite element method (CutFEM) for convection-diffusion problems posed on mixed-dimensional domains, i.e., unions of manifolds of different dimensions arranged in a hierarchical structure where lower-dimensional components…

数值分析 · 数学 2026-04-09 Erik Burman , Peter Hansbo , Mats G. Larson , Karl Larsson , Shantiram Mahata

Reaction-diffusion (Turing) systems are fundamental to the formation of spatial patterns in nature and engineering. These systems are governed by a set of non-linear partial differential equations containing parameters that determine the…

机器学习 · 计算机科学 2022-11-28 Jordon Kho , Winston Koh , Jian Cheng Wong , Pao-Hsiung Chiu , Chin Chun Ooi

We present a novel artificial diffusion method to circumvent the instabilities associated with the standard finite element approximation of convection-diffusion equations. Motivated by the micromorphic approach, we introduce an auxiliary…

数值分析 · 数学 2025-06-19 Soheil Firooz , B. Daya Reddy , Paul Steinmann

In this article, we present a multispecies reaction-advection-diffusion partial differential equation (PDE) coupled with linear elasticity for modeling tumor growth. The model aims to capture the phenomenological features of glioblastoma…

医学物理 · 物理学 2019-05-28 Shashank Subramanian , Amir Gholami , George Biros

We propose a novel finite element method scheme for singularly perturbed advection-diffusion-reaction problems, which combines certain quantum-assisted stabilization scheme with a classical h-adaptive approach to provide automatic error…

数值分析 · 数学 2024-11-20 R. H. Drebotiy , H. A. Shynkarenko