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Collagen fibrils, cable-like assemblies of long biological molecules, are dominant components of connective tissues. Their determinant morphological and functional roles motivated a large number of studies concerning their formation and…

软凝聚态物质 · 物理学 2011-04-04 Jean Charvolin , Jean-François Sadoc

The shape of the cross section of a dense fiber bundle is related to the symmetry of its molecular packing. However, this statement might be belied by type I collagen fibrils which have a rounded section of high symmetry while structural…

软凝聚态物质 · 物理学 2013-03-22 Jean Charvolin , Jean-François Sadoc

Mammalian tissues contain networks and ordered arrays of collagen fibrils originating from the periodic self-assembly of helical 300 nm long tropocollagen complexes. The fibril radius is typically between 25 to 250 nm, and tropocollagen at…

生物物理 · 物理学 2014-09-16 Aidan I Brown , Laurent Kreplak , Andrew D Rutenberg

Collagen fibrils are versatile self-assembled structures that provide mechanical integrity within mammalian tissues. The radius of collagen fibrils vary widely depending on experimental conditions \textit{in vitro} or anatomical location…

软凝聚态物质 · 物理学 2018-02-26 Samuel Cameron , Laurent Kreplak , Andrew D. Rutenberg

To describe the interaction between longitudinal density modulations along collagen fibrils (the D-band) with the radial twist-field of molecular orientation (double-twist), we couple phase-field-crystal (PFC) with liquid-crystalline…

软凝聚态物质 · 物理学 2020-03-25 Samuel Cameron , Laurent Kreplak , Andrew D. Rutenberg

The lysyl oxidase (LOX) enzyme that catalyses cross-link formation during the assembly of collagen fibrils in vivo is too large to diffuse within assembled fibrils, and so is incompatible with a fully equilibrium mechanism for fibril…

生物物理 · 物理学 2021-09-30 Matthew P. Leighton , Laurent Kreplak , Andrew D. Rutenberg

The one-dimensional problem of selecting the triple helix with the highest volume fraction is solved and hence the condition for a helix to be close-packed is obtained. The close-packed triple helix is shown to have a pitch angle of $v_{CP}…

生物物理 · 物理学 2010-11-11 Jakob Bohr , Kasper Olsen

Twisted and rope-like assemblies of filamentous molecules are common and vital structural elements in cells and tissue of living organisms. We study the intrinsic frustration occurring in these materials between the two-dimensional…

软凝聚态物质 · 物理学 2015-06-03 Amir Azadi , Gregory M. Grason

Collagen type I is well-known for its outstanding mechanical properties which it inherits from its hierarchical structure. Collagen type I fibrils may be viewed as an heterogeneous material made of protein, macromolecules (such as…

软凝聚态物质 · 物理学 2024-06-27 Maxime Vassaux

We report the imaging of tendon, a connective tissue rich in collagen type I proteins, with Interferometric Second Harmonic Generation (I-SHG) microscopy. We observed that the noncentrosymmetric structural organization can be maintained…

Collagen fibril cross-sectional radii show no systematic variation between the interior and the periphery of fibril bundles, indicating an effectively constant rate of collagen incorporation into fibrils throughout the bundle. Such…

组织与器官 · 定量生物学 2016-09-13 Andrew D Rutenberg , Aidan I Brown , Laurent Kreplak

The predominant structural protein in vertebrates is collagen, which plays a key role in extracellular matrix and connective tissue mechanics. Despite its prevalence and physical importance in biology, the mechanical properties of molecular…

生物物理 · 物理学 2018-11-14 Naghmeh Rezaei , Aaron Lyons , Nancy R. Forde

The tridimensional configuration and the twist density of helical rods with varying cross section radius are studied within the framework of the Kirchhoff rod model. It is shown that the twist density increases when the cross section radius…

生物物理 · 物理学 2007-05-23 Alexandre F. da Fonseca , C. P. Malta

In articular cartilage the orientation of collagen fibres is not uniform, varying mostly with the depth on the tissue. Besides, the biomechanical response of each layer of the articular cartilage differs from the neighbouring ones, evolving…

生物物理 · 物理学 2016-01-21 S. Cortez , A. Completo , J. L. Alves

Certain bacteria form filamentous colonies when the cells fail to separate after dividing. In Bacillus subtilis, Bacillus thermus, and cyanobacteria, the filaments can wrap into complex supercoiled structures as the cells grow. The…

软凝聚态物质 · 物理学 2010-05-26 Charles W. Wolgemuth , Raymond E. Goldstein , Thomas R. Powers

Helical ribbons arise in many biological and engineered systems, often driven by anisotropic surface stress, residual strain, and geometric or elastic mismatch between layers of a laminated composite. A full mathematical analysis is…

数学物理 · 物理学 2012-09-18 Zi Chen , Carmel Majidi , David J. Srolovitz , Mikko Haataja

Ribbons are a class of slender structures whose length, width, and thickness are widely separated from each other. This scale separation gives a ribbon unusual mechanical properties in athermal macroscopic settings, e.g. it can bend without…

统计力学 · 物理学 2021-12-28 Ee Hou Yong , Farisan Dary , Luca Giomi , L. Mahadevan

Deformations that conserve the parallelism and the distances --between layers, in smectic phases; between columns, in columnar phases-- are commonplace in liquid crystals. The resulting deformed textures have the same mass density as in the…

软凝聚态物质 · 物理学 2015-06-24 M. -F. Achard , M. Kleman , Yu. A. Nastishin , H. -T. Nguyen

We investigate the elastic properties of anisotropic elastomers with a double-twist director field, which is a model for collagen fibrils or blue phases. We observe a significant Poynting-like effect, coupling torsion (fibril twist) and…

软凝聚态物质 · 物理学 2023-10-02 Matthew P. Leighton , Laurent Kreplak , Andrew D. Rutenberg

We study the equilibrium configurations related to the growth of an elastic fibre in a confining flexible ring. This system represents a paradigm for a variety of biological, medical, and engineering problems. We consider a simplified…

软凝聚态物质 · 物理学 2022-10-17 Arsenio Cutolo , Massimiliano Fraldi , Gaetano Napoli , Giuseppe Puglisi
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