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相关论文: Intrinsic universality in tile self-assembly requi…

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The field of algorithmic self-assembly is concerned with the computational and expressive power of nanoscale self-assembling molecular systems. In the well-studied cooperative, or temperature 2, abstract tile assembly model it is known that…

计算复杂性 · 计算机科学 2017-05-31 Pierre-Étienne Meunier , Damien Woods

We prove a Pumping Lemma for the noncooperative abstract Tile Assembly Model, a model central to the theory of algorithmic self-assembly since the beginning of the field. This theory suggests, and our result proves, that small differences…

计算复杂性 · 计算机科学 2020-02-11 Pierre-Étienne Meunier , Damien Regnault , Damien Woods

This short survey of recent work in tile self-assembly discusses the use of simulation to classify and separate the computational and expressive power of self-assembly models. The journey begins with the result that there is a single…

计算几何 · 计算机科学 2013-09-06 Damien Woods

We show that the Tile Assembly Model exhibits a strong notion of universality where the goal is to give a single tile assembly system that simulates the behavior of any other tile assembly system. We give a tile assembly system that is…

计算复杂性 · 计算机科学 2016-09-08 David Doty , Jack H. Lutz , Matthew J. Patitz , Scott M. Summers , Damien Woods

We prove the computational weakness of a model of tile assembly that has so far resisted many attempts of formal analysis or positive constructions. Specifically, we prove that, in Winfree's abstract Tile Assembly Model, when restricted to…

计算复杂性 · 计算机科学 2015-07-31 Pierre-Étienne Meunier , Damien Regnault

We prove a result which strongly hints at the computational weakness of a model of tile assembly that has so far resisted many attempts of formal analysis or positive constructions. Specifically, we prove that, in Winfree's abstract Tile…

计算复杂性 · 计算机科学 2016-10-28 Pierre-Étienne Meunier , Damien Regnault

We prove that the number of tile types required to build squares of size n x n, in Winfree's abstract Tile Assembly Model, when restricted to using only non-cooperative tile bindings, is at least 2n-1, which is also the best known upper…

计算复杂性 · 计算机科学 2013-12-10 Pierre-Étienne Meunier

We show the first asymptotically efficient constructions in the so-called "noncooperative planar tile assembly" model. Algorithmic self-assembly is the study of the local, distributed, asynchronous algorithms ran by molecules to…

计算复杂性 · 计算机科学 2021-07-19 Pierre-Etienne Meunier , Damien Regnault

We show the first non-trivial positive algorithmic results (i.e. programs whose output is larger than their size), in a model of self-assembly that has so far resisted many attempts of formal analysis or programming: the planar…

计算几何 · 计算机科学 2014-07-11 Pierre-Étienne Meunier

The well-studied Two-Handed Tile Assembly Model (2HAM) is a model of tile assembly in which pairs of large assemblies can bind, or self-assemble, together. In order to bind, two assemblies must have matching glues that can simultaneously…

We investigate the power of the Wang tile self-assembly model at temperature 1, a threshold value that permits attachment between any two tiles that share even a single bond. When restricted to deterministic assembly in the plane, no…

计算复杂性 · 计算机科学 2015-03-13 Matthew Cook , Yunhui Fu , Robert T. Schweller

Is Winfree's abstract Tile Assembly Model (aTAM) "powerful?" Well, if certain tiles are required to "cooperate" in order to be able to bind to a growing tile assembly (a.k.a., temperature 2 self-assembly), then Turing universal computation…

新兴技术 · 计算机科学 2012-02-02 Matthew J. Patitz , Robert T. Schweller , Scott M. Summers

In this paper we explore the power of geometry to overcome the limitations of non-cooperative self-assembly. We define a generalization of the abstract Tile Assembly Model (aTAM), such that a tile system consists of a collection of…

新兴技术 · 计算机科学 2014-08-20 Sándor P. Fekete , Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers , Robert T. Schweller

We prove that the abstract Tile Assembly Model (aTAM) of nanoscale self-assembly is intrinsically universal. This means that there is a single tile assembly system U that, with proper initialization, simulates any tile assembly system T.…

数据结构与算法 · 计算机科学 2012-04-10 David Doty , Jack H. Lutz , Matthew J. Patitz , Robert T. Schweller , Scott M. Summers , Damien Woods

In this paper, we extend existing results about simulation and intrinsic universality in a model of tile-based self-assembly. Namely, we work within the 2-Handed Assembly Model (2HAM), which is a model of self-assembly in which assemblies…

计算几何 · 计算机科学 2015-03-17 Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers

In the abstract Tile Assembly Model (aTAM), the phenomenon of cooperation occurs when the attachment of a new tile to a growing assembly requires it to bind to more than one tile already in the assembly. Often referred to as…

新兴技术 · 计算机科学 2014-03-18 Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers

We consider non-cooperative binding, so-called 'temperature 1', in deterministic or directed (called here confluent) tile self-assembly systems in two dimensions and show a necessary and sufficient condition for such system to have an…

计算复杂性 · 计算机科学 2022-02-11 Jérôme Durand-Lose , Hendrik Jan Hoogeboom , Nataša Jonoska

In this paper we investigate the computational power of the polygonal tile assembly model (polygonal TAM) at temperature 1, i.e. in non-cooperative systems. The polygonal TAM is an extension of Winfree's abstract tile assembly model (aTAM)…

计算几何 · 计算机科学 2015-08-20 Oscar Gilbert , Jacob Hendricks , Matthew J. Patitz , Trent A. Rogers

We investigate a fundamental question regarding a benchmark class of shapes in one of the simplest, yet most widely utilized abstract models of algorithmic tile self-assembly. Specifically, we study the directed tile complexity of a $k…

数据结构与算法 · 计算机科学 2020-07-23 David Furcy , Scott M. Summers , Logan Withers

Working in a three-dimensional variant of Winfree's abstract Tile Assembly Model, we show that, for an arbitrary finite, connected shape $X \subset \mathbb{Z}^2$, there is a tile set that uniquely self-assembles into a 3D representation of…

计算几何 · 计算机科学 2015-07-24 David Furcy , Scott M. Summers
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