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Cellular automata (CA) are a class of computational models that exhibit rich dynamics emerging from the local interaction of cells arranged in a regular lattice. In this work we focus on a generalised version of typical CA, called graph…

机器学习 · 计算机科学 2021-10-28 Daniele Grattarola , Lorenzo Livi , Cesare Alippi

Three cellular automaton (CA) models of increasing complexity are introduced to model driven diffusive systems related to the generalized Frenkel-Kontorova (FK) models recently proposed by Braun [Phys.Rev.E58, 1311 (1998)]. The models are…

凝聚态物理 · 物理学 2009-10-31 Bing-Hong Wang , Y. R. Kwong , P. M. Hui , Bambi Hu

A multi-scale framework was recently proposed for more realistic molecular dynamics simulations in continuum solvent models by coupling a molecular mechanics treatment of solute with a fluid mechanics treatment of solvent, where we…

生物物理 · 物理学 2018-01-17 Li Xiao , Ray Luo

Droplets form a cornerstone of the spatiotemporal organization of biomolecules in cells. These droplets are controlled using physical processes like chemical reactions and imposed gradients, which are costly to simulate using traditional…

软凝聚态物质 · 物理学 2022-06-23 Ajinkya Kulkarni , Estefania Vidal-Henriquez , David Zwicker

Much work has been devoted to analysing thermodynamic models for solid dispersions with a view to identifying regions in the phase diagram where amorphous phase separation or drug recrystallization can occur. However, detailed partial…

软凝聚态物质 · 物理学 2020-06-26 Martin Meere , Giuseppe Pontrelli , Sean McGinty

We Propose A Novel Automaton Model which uses Arithmetic Operations as the Evolving Rules, each cell has the states of the Natural Numbers k = (N), a radius of r = 1/2 and operates on an arbitrary input size. The Automaton reads an…

形式语言与自动机理论 · 计算机科学 2017-05-18 Abdulrhman Elnekiti

A general mathematical method is presented for the systematic construction of coupled map lattices (CMLs) out of deterministic cellular automata (CAs). The entire CA rule space is addressed by means of a universal map for CAs that we have…

元胞自动机与格子气 · 物理学 2016-06-09 Vladimir García-Morales

Drug efficacy depends on its capacity to permeate across the cell membrane. We consider the prediction of passive drug-membrane permeability coefficients. Beyond the widely recognized correlation with hydrophobicity, we additionally…

化学物理 · 物理学 2021-06-30 Arghya Dutta , Jilles Vreeken , Luca M. Ghiringhelli , Tristan Bereau

Particle-In-Cell (PIC) methods are frequently used for kinetic, high-fidelity simulations of plasmas. Implicit formulations of PIC algorithms feature strong conservation properties, up to numerical round-off errors, and are not subject to…

等离子体物理 · 物理学 2021-10-26 R. Kube , R. M. Churchill , B. Sturdevant

We introduce Biomaker CA: a Biome Maker project using Cellular Automata (CA). In Biomaker CA, morphogenesis is a first class citizen and small seeds need to grow into plant-like organisms to survive in a nutrient starved environment and…

人工智能 · 计算机科学 2023-07-19 Ettore Randazzo , Alexander Mordvintsev

We present a parallel implementation of cellular automata to simulate chemical reactions on surfaces. The scaling of the computer time with the number of processors for this parallel implementation is quite close to the ideal T/P, where T…

元胞自动机与格子气 · 物理学 2007-05-23 R. Salazar , A. P. J. Jansen , V. N. Kuzovkov

A method for studying the qualitative dynamical properties of abstract computing machines based on the approximation of their program-size complexity using a general lossless compression algorithm is presented. It is shown that the…

计算复杂性 · 计算机科学 2011-01-24 Hector Zenil

Plasma accelerators utilize strong electric fields in plasma waves to accelerate charged particles, making them a compact alternative to radiofrequency technologies. Discharge capillaries are plasma sources used in plasma accelerator…

Drug delivery through electroporation could be highly beneficial for the treatment of different types of diseased tissues within the human body. In this work, a mathematical model of reversible tissue electroporation is presented for…

泛函分析 · 数学 2022-08-03 Nilay Mondal , D. C. Dalal

Quantum computation based on quantum cellular automata (QCA) can greatly reduce the control and precision necessary for experimental implementations of quantum information processing. A QCA system consists of a few species of qubits in…

量子物理 · 物理学 2009-11-10 Yaakov S. Weinstein , C. Stephen Hellberg

Cellular automata are a famous model of computation, yet it is still a challenging task to assess the computational capacity of a given automaton; especially when it comes to showing negative results. In this paper, we focus on studying…

形式语言与自动机理论 · 计算机科学 2024-05-14 Barbora Hudcová , Jakub Krásenský

CA has grown as potential classifier for addressing major problems in bioinformatics. Lot of bioinformatics problems like predicting the protein coding region, finding the promoter region, predicting the structure of protein and many other…

计算工程、金融与科学 · 计算机科学 2014-01-13 Pokkuluri Kiran Sree , Inampudi Ramesh Babu , SSSN Usha Devi Nedunuri

In the fields of computation and neuroscience, much is still unknown about the underlying computations that enable key cognitive functions including learning, memory, abstraction and behavior. This paper proposes a mathematical and…

人工智能 · 计算机科学 2025-01-14 Jeet Singh

We define a cellular automaton where a resting cell excites if number of its excited neighbours belong to some specified interval and boundaries of the interval change depending on ratio of excited and refractory neighbours in the cell's…

元胞自动机与格子气 · 物理学 2013-02-27 Andrew Adamatzky

Computational modelling is helpful for elucidating the cellular mechanisms driving biological morphogenesis. Previous simulation studies of blood vessel growth based on the Cellular Potts model (CPM) proposed that elongated, adhesive or…

细胞行为 · 定量生物学 2015-09-07 Dimitrios Palachanis , András Szabó , Roeland M. H. Merks