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In two-way contingency tables we sometimes find that frequencies along the diagonal cells are relatively larger(or smaller) compared to off-diagonal cells, particularly in square tables with the common categories for the rows and the…

统计方法学 · 统计学 2009-01-29 Hisayuki Hara , Akimichi Takemura , Ruriko Yoshida

To evaluate a fitting of a statistical model to given data, calculating a conditional $p$ value by a Markov chain Monte Carlo method is one of the effective approaches. For this purpose, a Markov basis plays an important role because it…

统计方法学 · 统计学 2017-02-06 Satoshi Aoki , Takayuki Hibi

In this paper we study the computation of Markov bases for contingency tables whose cell entries have an upper bound. In general a Markov basis for unbounded contingency table under a certain model differs from a Markov basis for bounded…

组合数学 · 数学 2010-01-19 Fabio Rapallo , Ruriko Yoshida

Markov chain models are used in various fields, such behavioral sciences or econometrics. Although the goodness of fit of the model is usually assessed by large sample approximation, it is desirable to use conditional tests if the sample…

统计理论 · 数学 2012-01-11 Akimichi Takemura , Hisayuki Hara

We consider conditional exact tests of factor effects in designed experiments for discrete response variables. Similarly to the analysis of contingency tables, Markov chain Monte Carlo methods can be used for performing exact tests,…

统计理论 · 数学 2014-03-14 Satoshi Aoki

In this work we define log-linear models to compare several square contingency tables under the quasi-independence or the quasi-symmetry model, and the relevant Markov bases are theoretically characterized. Through Markov bases, an exact…

统计理论 · 数学 2017-04-18 Cristiano Bocci , Fabio Rapallo

We consider conditional exact tests of factor effects in designed experiments for discrete response variables. Similarly to the analysis of contingency tables, a Markov chain Monte Carlo method can be used for performing exact tests, when…

统计理论 · 数学 2009-11-20 Satoshi Aoki , Akimichi Takemura

In this paper, we introduce the fundamental notion of a Markov basis, which is one of the first connections between commutative algebra and statistics. The notion of a Markov basis is first introduced by Diaconis and Sturmfels (1998) for…

统计理论 · 数学 2016-07-27 Satoshi Aoki

It has been well-known that for two-way contingency tables with fixed row sums and column sums the set of square-free moves of degree two forms a Markov basis. However when we impose an additional constraint that the sum of a subtable is…

组合数学 · 数学 2009-04-27 Hisayuki Hara , Akimichi Takemura , Ruriko Yoshida

We consider Markov basis arising from fractional factorial designs with three-level factors. Once we have a Markov basis, $p$ values for various conditional tests are estimated by the Markov chain Monte Carlo procedure. For designed…

统计方法学 · 统计学 2009-11-22 Satoshi Aoki , Akimichi Takemura

We consider Markov chain Monte Carlo methods for calculating conditional p values of statistical models for count data arising in Box-Behnken designs. The statistical model we consider is a discrete version of the first-order model in the…

统计理论 · 数学 2018-08-22 Satoshi Aoki , Takayuki Hibi , Hidefumi Ohsugi

It is known that a Markov basis of the binary graph model of a graph $G$ corresponds to a set of binomial generators of cut ideals $I_{\widehat{G}}$ of the suspension $\widehat{G}$ of $G$. In this paper, we give another application of cut…

统计理论 · 数学 2014-05-15 Satoshi Aoki , Takayuki Hibi , Hidefumi Ohsugi

Markov chains are fundamental models for stochastic dynamics, with applications in a wide range of areas such as population dynamics, queueing systems, reinforcement learning, and Monte Carlo methods. Estimating the transition matrix and…

统计理论 · 数学 2026-01-26 Lasse Leskelä , Maximilien Dreveton

We present a computational approach for generating Markov bases for multi-way contingency tables whose cells counts might be constrained by fixed marginals and by lower and upper bounds. Our framework includes tables with structural zeros…

统计计算 · 统计学 2014-08-21 Adrian Dobra

Randomized experiments are often performed to study the causal effects of interest. Blocking is a technique to precisely estimate the causal effects when the experimental material is not homogeneous. It involves stratifying the available…

统计方法学 · 统计学 2023-02-21 Abhishek Kumar Umrawal

We construct Bayesian and frequentist finite-sample goodness-of-fit tests for three different variants of the stochastic blockmodel for network data. Since all of the stochastic blockmodel variants are log-linear in form when block…

Accurate modelling of the joint extremal dependence structure within a stationary time series is a challenging problem that is important in many applications.\ Several previous approaches to this problem are only applicable to certain types…

统计方法学 · 统计学 2023-03-09 Graeme Auld , Ioannis Papastathopoulos

This paper is concerned with the topological invariant of a graph given by the maximum degree of a Markov basis element for the corresponding graph model for binary contingency tables. We describe a degree four Markov basis for the model…

组合数学 · 数学 2007-06-13 Mike Develin , Seth Sullivant

We study Markov bases of decomposable graphical models consisting of primitive moves (i.e., square-free moves of degree two) by determining the structure of fibers of sample size two. We show that the number of elements of fibers of sample…

统计理论 · 数学 2010-03-04 Hisayuki Hara , Satoshi Aoki , Akimichi Takemura

We study the geometric structure of the statistical models for two-by-two contingency tables. One or two odds ratios are fixed and the corresponding models are shown to be a portion of a ruled quadratic surface or a segment. Some pointers…

统计理论 · 数学 2007-06-13 Enrico Carlini , Fabio Rapallo
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