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Finding a maximum clique in a given graph is one of the fundamental NP-hard problems. We compare two multi-core thread-parallel adaptations of a state-of-the-art branch and bound algorithm for the maximum clique problem, and provide a novel…

分布式、并行与集群计算 · 计算机科学 2014-09-05 Ciaran McCreesh , Patrick Prosser

Finding optimal evolutionary trees from sequence data is typically an intractable problem, and there is usually no way of knowing how close to optimal the best tree from some search truly is. The problem would seem to be particularly acute…

种群与进化 · 定量生物学 2013-06-07 Dietrich Radel , Andreas Sand , Mike Steel

A graph $G=(V,E)$ is called $(k,\ell)$-full if $G$ contains a subgraph $H=(V,F)$ of $k|V|-\ell$ edges such that, for any non-empty $F' \subseteq F$, $|F'| \leq k|V(F')| - \ell$ holds. Here, $V(F')$ denotes the set of vertices incident to…

数据结构与算法 · 计算机科学 2011-03-15 Hiro Ito , Shin-ichi Tanigawa , Yuichi Yoshida

We present an algorithm that allows for find-closest-point and kNN-style traversals of left-balanced k-d trees, without the need for either recursion or software-managed stacks; instead using only current and last previously traversed node…

数据结构与算法 · 计算机科学 2022-11-04 Ingo Wald

Searching spatial data is an important operation for scientific simulations which are performed mostly with periodic boundary conditions. An R-Tree is a well known tree data structure used to contain spatial objects and it is capable of…

数据结构与算法 · 计算机科学 2017-12-11 Toru Niina

Let $T$ be a binary search tree. We prove two results about the behavior of the Splay algorithm (Sleator and Tarjan 1985). Our first result is that inserting keys into an empty binary search tree via splaying in the order of either $T$'s…

数据结构与算法 · 计算机科学 2019-07-16 Caleb C. Levy , Robert E. Tarjan

We consider an index data structure for similar strings. The generalized suffix tree can be a solution for this. The generalized suffix tree of two strings $A$ and $B$ is a compacted trie representing all suffixes in $A$ and $B$. It has…

数据结构与算法 · 计算机科学 2013-05-09 Joong Chae Na , Heejin Park , Maxime Crochemore , Jan Holub , Costas S. Iliopoulos , Laurent Mouchard , Kunsoo Park

Algorithms for learning decision trees often include heuristic local-search operations such as (1) adjusting the threshold of a cut or (2) also exchanging the feature of that cut. We study minimizing the number of classification errors by…

机器学习 · 计算机科学 2025-10-15 Juha Harviainen , Frank Sommer , Manuel Sorge

The $k$d-tree is one of the most widely used data structures to manage multi-dimensional data. Due to the ever-growing data volume, it is imperative to consider parallelism in $k$d-trees. However, we observed challenges in existing parallel…

数据结构与算法 · 计算机科学 2025-01-08 Ziyang Men , Zheqi Shen , Yan Gu , Yihan Sun

The dynamic partial sorting problem asks for an algorithm that maintains lists of numbers under the link, cut and change value operations, and queries the sorted sequence of the $k$ least numbers in one of the lists. We first solve the…

数据结构与算法 · 计算机科学 2014-04-21 Jiamou Liu , Kostya Ross

The minimum linear arrangement problem on a network consists of finding the minimum sum of edge lengths that can be achieved when the vertices are arranged linearly. Although there are algorithms to solve this problem on trees in polynomial…

数据分析、统计与概率 · 物理学 2017-12-14 Juan Luis Esteban , Ramon Ferrer-i-Cancho , Carlos Gómez-Rodríguez

The rotation search problem aims to find a 3D rotation that best aligns a given number of point pairs. To induce robustness against outliers for rotation search, prior work considers truncated least-squares (TLS), which is a non-convex…

最优化与控制 · 数学 2022-07-22 Liangzu Peng , Mahyar Fazlyab , René Vidal

Flat combining is a concurrency threaded technique whereby one thread performs all the operations in batch by scanning a queue of operations to-be-done and performing them together. Flat combining makes sense as long as k operations each…

分布式、并行与集群计算 · 计算机科学 2019-12-25 Sergio Sainz-Palacios

Machine Learning Techniques, properly combined with Data Structures, have resulted in Learned Static Indexes, innovative and powerful tools that speed-up Binary Search, with the use of additional space with respect to the table being…

信息检索 · 计算机科学 2022-09-20 Domenico Amato , Giosuè Lo Bosco , Raffaele Giancarlo

We present a new approximation algorithm for the treewidth problem which finds an upper bound on the treewidth and constructs a corresponding tree decomposition as well. Our algorithm is a faster variation of Reed's classical algorithm. For…

数据结构与算法 · 计算机科学 2022-06-24 Mahdi Belbasi , Martin Fürer

A spanning tree of an unweighted graph is a minimum average stretch spanning tree if it minimizes the ratio of sum of the distances in the tree between the end vertices of the graph edges and the number of graph edges. We consider the…

数据结构与算法 · 计算机科学 2014-04-15 N. S. Narayanaswamy , G. Ramakrishna

We show how to construct a dynamic ordered dictionary, supporting insert/delete/rank/select on a set of $n$ elements from a universe of size $U$, that achieves the optimal amortized expected time complexity of $O(1 + \log n / \log \log U)$,…

数据结构与算法 · 计算机科学 2025-10-23 William Kuszmaul , Jingxun Liang , Renfei Zhou

It has been proved that the spanning tree from a given network has the optimal synchronizability, which means the index $R=\lambda_{N}/\lambda_{2}$ reaches the minimum 1. Although the optimal synchronizability is corresponding to the…

混沌动力学 · 物理学 2015-05-13 An Zeng , Yanqing Hu , Zengru Di

This paper presents a general technique for optimally transforming any dynamic data structure that operates on atomic and indivisible keys by constant-time comparisons, into a data structure that handles unbounded-length keys whose…

数据结构与算法 · 计算机科学 2013-06-04 Amihood Amir , Gianni Franceschini , Roberto Grossi , Tsvi Kopelowitz , Moshe Lewenstein , Noa Lewenstein

The graph invariant EPT-sum has cropped up in several unrelated fields in later years: As an objective function for hierarchical clustering, as a more fine-grained version of the classical edge ranking problem, and, specifically when the…

数据结构与算法 · 计算机科学 2024-07-08 Svein Høgemo
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