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Understanding mosquitoes life cycle is of great interest presently because of the increasing impact of vector borne diseases in several countries. There is evidence of oscillations in mosquito populations independent of seasonality, still…

Most living organisms show highly conserved physiological changes following a 24-hour cycle which goes by the name of circadian rhythm. Among experimental models, the effects of light-dark cycle have been recently investigated in the larval…

Cycles are fundamental to human health and behavior. However, modeling cycles in time series data is challenging because in most cases the cycles are not labeled or directly observed and need to be inferred from multidimensional…

社会与信息网络 · 计算机科学 2018-04-23 Emma Pierson , Tim Althoff , Jure Leskovec

Signals with varying periodicity frequently appear in real-world phenomena, necessitating the development of efficient modelling techniques to map the measured nonlinear timeline to linear time. Here we propose a regression model that…

In biomedical studies, longitudinal processes are collected till time-to-event, sometimes on nested timescales (example, days within months). Most of the literature in joint modeling of longitudinal and time-to-event data has focused on…

统计方法学 · 统计学 2023-07-19 Abhisek Saha , Ling Ma , Animikh Biswas , Rajeshwari Sundaram

Motivated by the cyclic pattern of reproductive regimes observed in some species of green flies (``{\it aphids}''), we simulate the evolution of a population enduring harsh seasonal conditions for survival. The reproductive regime of each…

统计力学 · 物理学 2015-06-24 J. S. Sa' Martins , Adriana Racco

Circadian rhythmicity lies at the center of various important physiological and behavioral processes in mammals, such as sleep, metabolism, homeostasis, mood changes and more. It has been shown that this rhythm arises from self-sustained…

神经元与认知 · 定量生物学 2023-02-08 Yorgos M. Psarellis , Michail Kavousanakis , Michael A. Henson , Ioannis G. Kevrekidis

A nonhomogeneous hidden semi-Markov model is proposed to segment toroidal time series according to a finite number of latent regimes and, simultaneously, estimate the influence of time-varying covariates on the process' survival under each…

应用统计 · 统计学 2023-12-25 Francesco Lagona , Marco Mingione

Modeling biological rhythms helps understand the complex principles behind the physical and psychological abnormalities of human bodies, to plan life schedules, and avoid persisting fatigue and mood and sleep alterations due to the…

定量方法 · 定量生物学 2021-09-15 Runze Yan , Afsaneh Doryab

When analysing gene expression time series data an often overlooked but crucial aspect of the model is that the regulatory network structure may change over time. Whilst some approaches have addressed this problem previously in the…

分子网络 · 定量生物学 2012-03-05 Thomas Thorne , Michael P. H Stumpf

The main purpose of this paper is to study the existence of periodic solutions for a nonautonomous differential-difference system describing the dynamics of hematopoietic stem cell (HSC) population under some external periodic regulatory…

动力系统 · 数学 2020-04-30 Mostafa Adimy , Pablo Amster , Julián Epstein

Electroencephalography (EEG) monitors ---by either intrusive or noninvasive electrodes--- time and frequency variations and spectral content of voltage fluctuations or waves, known as brain rhythms, which in some way uncover activity during…

神经元与认知 · 定量生物学 2019-03-13 Javier A. Galadí , Joaquín J. Torres , J. Marro

We introduce the Hyperedge-triggered Hawkes (HTH) process for inferring higher-order interaction structure in multi-cellular systems from asynchronous event-time data. Beyond standard pairwise excitation, the HTH intensity includes a term…

统计方法学 · 统计学 2026-05-27 Zihan Xu

Body tides reveal information about planetary interiors and affect their evolution. Most models to compute body tides rely on the assumption of a spherically-symmetric interior. However, several processes can lead to lateral variations of…

地球与行星天体物理 · 物理学 2024-06-05 Marc Rovira-Navarro , Isamu Matsuyama , Alexander Berne

The widespread adoption of mobile and wearable sensing technologies has enabled continuous and personalized monitoring of affect, mood disorders, and stress. When combined with ecological self-report questionnaires, these systems offer a…

机器学习 · 计算机科学 2025-09-03 Louis Simon , Mohamed Chetouani

The primary goal of this study is to observe how complex the behaviors of Cepheids can be, and to show how the continued monitoring of Cepheids at multiple wavelengths can begin to reveal their "secret lives." We aim to achieve this through…

太阳与恒星天体物理 · 物理学 2016-02-24 Scott G. Engle

In mammals, most cells in the brain and peripheral tissues generate circadian (~24hr) rhythms autonomously. These self-sustained rhythms are coordinated and entrained by a master circadian clock in the suprachiasmatic nucleus (SCN). Within…

分子网络 · 定量生物学 2014-06-10 Jae Kyoung Kim , Zachary P. Kilpatrick , Matthew R. Bennett , Krešimir Josić

Rhythmic data are ubiquitous in the life sciences. Biologists need reliable statistical tests to identify whether a particular experimental treatment has caused a significant change in a rhythmic signal. When these signals display…

High-harmonic spectroscopy (HHS) is a nonlinear all-optical technique with inherent attosecond temporal resolution, which has been applied successfully to a broad variety of systems in the gas phase and solid state. Here, we extend HHS to…

Many biological processes display oscillatory behavior based on an approximately 24 hour internal timing system specific to each individual. One process of particular interest is gene expression, for which several circadian transcriptomic…

应用统计 · 统计学 2024-12-23 Michael Gorczyca , Tavish McDonald , Justice Sefas