相关论文: Gibbs fragmentation trees

We study the fundamental question of how likely it is that two randomly chosen trees are isomorphic to each other for different models of random trees. We show that the probability decays exponentially for rooted labeled trees as well as…

The size of the largest common subtree (maximum agreement subtree) of two independent uniform random binary trees on $n$ leaves is known to be between orders $n^{1/8}$ and $n^{1/2}$. By a construction based on recursive splitting and…

Gibbs-type random probability measures, or Gibbs-type priors, are arguably the most "natural" generalization of the celebrated Dirichlet prior. Among them the two parameter Poisson-Dirichlet prior certainly stands out for the mathematical…

We introduce and study interval partition diffusions with Poisson--Dirichlet$(\alpha,\theta)$ stationary distribution for parameters $\alpha\in(0,1)$ and $\theta\ge 0$. This extends previous work on the cases $(\alpha,0)$ and…

In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively (from the root) split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities…

We define the beta diffusion tree, a random tree structure with a set of leaves that defines a collection of overlapping subsets of objects, known as a feature allocation. A generative process for the tree structure is defined in terms of…

We introduce a simple tree growth process that gives rise to a new two-parameter family of discrete fragmentation trees that extends Ford's alpha model to multifurcating trees and includes the trees obtained by uniform sampling from…

We introduce the Pitman Yor Diffusion Tree (PYDT) for hierarchical clustering, a generalization of the Dirichlet Diffusion Tree (Neal, 2001) which removes the restriction to binary branching structure. The generative process is described…

Consider a discrete locally finite subset $\Gamma$ of $R^d$ and the complete graph $(\Gamma,E)$, with vertices $\Gamma$ and edges $E$. We consider Gibbs measures on the set of sub-graphs with vertices $\Gamma$ and edges $E'\subset E$. The…

We study the distribution of fringe trees in Patricia tries (extending earlier results by Ischebeck (2025)) and compressed binary search trees; both cases are random binary trees that have been compressed by deleting nodes of outdegree 1 so…

We introduce a notion of finite sampling consistency for phylogenetic trees and show that the set of finitely sampling consistent and exchangeable distributions on n leaf phylogenetic trees is a polytope. We use this polytope to show that…

In this paper, we study the overlap distribution and Gibbs measure of the Branching Random Walk with Gaussian increments on a binary tree. We first prove that the Branching Random Walk is 1 step Replica Symmetry Breaking and give a precise…

Discrete random probability measures and the exchangeable random partitions they induce are key tools for addressing a variety of estimation and prediction problems in Bayesian inference. Indeed, many popular nonparametric priors, such as…

In this paper we study random partitions of 1,...n, where every cluster of size j can be in any of w\_j possible internal states. The Gibbs (n,k,w) distribution is obtained by sampling uniformly among such partitions with k clusters. We…

Applying a method to reconstruct a phylogenetic tree from random data provides a way to detect whether that method has an inherent bias towards certain tree `shapes'. For maximum parsimony, applied to a sequence of random 2-state data, each…

We describe the underlying probabilistic interpretation of alpha and beta divergences. We first show that beta divergences are inherently tied to Tweedie distributions, a particular type of exponential family, known as exponential…

We give correct explicit formulas for the probabilities of rooted binary trees and cladograms under Ford's $\alpha$-model.

In algebraic statistics, the maximum likelihood degree of a statistical model refers to the number of solutions (counted with multiplicity) of the score equations over the complex field. In this paper, the maximum likelihood degree of the…

We study analytically the late time statistics of the number of particles in a growing tree model introduced by Aldous and Shields. In this model, a cluster grows in continuous time on a binary Cayley tree, starting from the root, by…

Statistical inference on biodiversity has a rich history going back to RA Fisher. An influential ecological theory suggests the existence of a fundamental biodiversity number, denoted $\alpha$, which coincides with the precision parameter…