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In this technical note, we address an unresolved challenge in neuroimaging statistics: how to determine which of several datasets is the best for inferring neuronal responses. Comparisons of this kind are important for experimenters when…

A universal framework for modeling composites and fabrics of micro- and nanofibers, such as carbon nanotubes, carbon fibers and amyloid fibrils, is presented. Within this framework, fibers are represented with chains of rigid bodies, linked…

计算物理 · 物理学 2019-03-06 Igor A. Ostanin

We present a derivation of a multidomain model for the electric potential in bundles of randomly distributed axons with different radii. The FitzHugh-Nagumo dynamics is assumed on the axons' membrane, and the conductivity depends…

偏微分方程分析 · 数学 2025-03-25 Irina Pettersson , Antonina Rybalko , Volodymyr Rybalko

Understanding how networks of neurons process information is one of the key challenges in modern neuroscience. A necessary step to achieve this goal is to be able to observe the dynamics of large populations of neurons over a large area of…

图像与视频处理 · 电气工程与系统科学 2022-03-09 Pingfan Song , Herman Verinaz Jadan , Carmel L. Howe , Amanda J. Foust , Pier Luigi Dragotti

Much of our mechanistic understanding of the functions of biological macromolecules is based on static structural experiments, which can be modelled either as single structures or conformational ensembles. While these provide us with…

生物大分子 · 定量生物学 2025-10-02 Daria Gusew , Carl G. Henning Hansen , Kresten Lindorff-Larsen

Multi-modal MRIs are widely used in neuroimaging applications since different MR sequences provide complementary information about brain structures. Recent works have suggested that multi-modal deep learning analysis can benefit from…

计算机视觉与模式识别 · 计算机科学 2021-06-14 Jiahong Ouyang , Ehsan Adeli , Kilian M. Pohl , Qingyu Zhao , Greg Zaharchuk

Sensory neurons often have variable responses to repeated presentations of the same stimulus, which can significantly degrade the stimulus information contained in those responses. This information can in principle be preserved if…

神经元与认知 · 定量生物学 2019-04-24 Matthew R Whiteway , Karolina Socha , Vincent Bonin , Daniel A Butts

This article describes a numerical procedure designed to tune the parameters of periodically-driven dynamical systems to a state in which they exhibit rich dynamical behavior. This is achieved by maximizing the diversity of subharmonic…

混沌动力学 · 物理学 2017-02-13 Leandro M. Alonso

Dynamical systems are ubiquitous within science and engineering, from turbulent flow across aircraft wings to structural variability of proteins. Although some systems are well understood and simulated, scientific imaging often confronts…

计算机视觉与模式识别 · 计算机科学 2025-09-03 Ali SaraerToosi , Renbo Tu , Kamyar Azizzadenesheli , Aviad Levis

Living systems exhibit complex yet organized behavior on multiple spatiotemporal scales. To investigate the nature of multiscale coordination in living systems, one needs a meaningful and systematic way to quantify the complex dynamics, a…

适应与自组织系统 · 物理学 2020-03-11 Mengsen Zhang , William D. Kalies , J. A. Scott Kelso , Emmanuelle Tognoli

Real-world networks often benefit from capturing both local and global interactions. Inspired by multi-modal analysis in brain imaging, where structural and functional connectivity offer complementary views of network organization, we…

神经与进化计算 · 计算机科学 2025-08-11 Yang Li , Luopeiwen Yi , Tananun Songdechakraiwut

Dynamic functional connectivity (DFC) analysis involves measuring correlated neural activity over time across multiple brain regions. Significant regional correlations among neural signals, such as those obtained from resting-state…

Functional connectome extends the anatomical connectome by capturing the relations between neurons according to their activity and interactions. When these relations are causal, the functional connectome maps how neural activity flows…

神经元与认知 · 定量生物学 2020-11-10 Rahul Biswas , Eli Shlizerman

Discrete dynamical systems can exhibit complex behaviour from the iterative application of straightforward local rules. A famous example are cellular automata whose global dynamics are notoriously challenging to analyze. To address this, we…

无序系统与神经网络 · 物理学 2024-07-22 Freya Behrens , Barbora Hudcová , Lenka Zdeborová

The behaviour of neurons under the influence of periodic external input has been modelled very successfully by circle maps. The aim of this note is to extend certain aspects of this analysis to a much more general class of forcing…

神经元与认知 · 定量生物学 2009-03-27 T. Jaeger

Fibring of modal logics is a well-established formalism for combining countable families of modal logics into a single fibred language with common semantics, characterized by fibred models. Inspired by this formalism, fibring of neural…

人工智能 · 计算机科学 2025-09-30 Ouns El Harzli , Bernardo Cuenca Grau , Artur d'Avila Garcez , Ian Horrocks , Tarek R. Besold

Recent experimental advances in neuroscience have opened new vistas into the immense complexity of neuronal networks. This proliferation of data challenges us on two parallel fronts. First, how can we form adequate theoretical frameworks…

神经元与认知 · 定量生物学 2015-06-12 Madhu Advani , Subhaneil Lahiri , Surya Ganguli

The evaluation of collective modes is fundamental in the analysis of molecular dynamics simulations. Several methods are available to extract that information, i.e normal mode analysis, principal component and spectral analysis of…

计算物理 · 物理学 2017-09-11 Vito Dario Camiola , Valentina Tozzini

Among various soft computing approaches for time series forecasting, Fuzzy Cognitive Maps (FCM) have shown remarkable results as a tool to model and analyze the dynamics of complex systems. FCM have similarities to recurrent neural networks…

人工智能 · 计算机科学 2022-01-11 Omid Orang , Petrônio Cândido de Lima e Silva , Frederico Gadelha Guimarães

Modeling and parameter estimation for neuronal dynamics are often challenging because many parameters can range over orders of magnitude and are difficult to measure experimentally. Moreover, selecting a suitable model complexity requires a…

动力系统 · 数学 2018-01-31 J. E. Rubin , B. Krauskopf , H. M. Osinga