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A ternary reaction-diffusion model for early HIV infection dynamics, incorporating logistic growth of target cells, is introduced. According to in vitro and in vivo studies, random movement of target cells, infected cells, and virions and a…

种群与进化 · 定量生物学 2024-10-21 Florinda Capone , Roberta De Luca , Vincenzo Luongo

Tailoring the performance of next-generation high entropy materials requires a deep understanding of the competition between entropy-driven random solid solution and enthalpy-driven chemical ordering. Investigating such order and disorder…

材料科学 · 物理学 2026-03-24 Fanli Zhou , Hao Chen , Pengxiang Xu , Kai Yang , Zongrui Pei , Xianglin Liu

Stereoselective reactions (both chemical and enzymatic reactions) have been essential for origin of life, evolution, human biology and medicine. Since late 1960s, there have been numerous successes in the exciting new frontier of asymmetric…

机器学习 · 计算机科学 2021-10-13 Justin Li , Dakang Zhang , Yifei Wang , Christopher Ye , Hao Xu , Pengyu Hong

Detection of chiral molecules requires amplification of chirality to measurable levels. Typically, amplification mechanisms are considered at the microscopic scales of individual molecules and their aggregates. Here we demonstrate chirality…

软凝聚态物质 · 物理学 2015-07-28 Chenhui Peng , Oleg D. Lavrentovich

Explaining the origin of life requires us to explain how self-replication arises. To be specific, how can a self-replicating entity develop spontaneously from a chemical reaction system in which no reaction is self-replicating? Previously…

适应与自组织系统 · 物理学 2020-12-18 Yu Liu , David Sumpter

Statistical models provide a powerful and useful class of approximations for calculating reaction rates by bypassing the need for detailed, and often difficult, dynamical considerations. Such approaches invariably invoke specific…

化学物理 · 物理学 2020-04-01 Sourav Karmakar , Pankaj Kumar Yadav , Srihari Keshavamurthy

The transition from monolayers to multilayered structures in bacterial colonies is a fundamental step in biofilm development. Observed across different morphotypes and species, this transition is triggered within freely growing bacterial…

软凝聚态物质 · 物理学 2021-03-16 Zhihong You , Daniel J. G. Pearce , Anupam Sengupta , Luca Giomi

We study a lattice model for the spreading of fluid films, which are a few molecular layers thick, in narrow channels with inert lateral walls. We focus on systems connected to two particle reservoirs at different chemical potentials,…

统计力学 · 物理学 2009-11-13 C. Dotti , A. Gambassi , M. N. Popescu , S. Dietrich

Monte Carlo simulation was carried out to understand the influence of morphological inhomogeneity on carrier diffusion in organic thin films. The morphological inhomogeneity was considered in the simulation by incorporating the regions of…

材料科学 · 物理学 2013-10-28 S. Raj Mohan , Manoranjan P. Singh , M. P. Joshi , L. M. Kukreja

Assembly theory predicts that a distinguishing signature of life is its ability to produce complex molecules in abundance, opening new possibilities for life detection. Experimental validation of this approach has so far relied on abiotic…

生物物理 · 物理学 2025-09-08 Alexandre Champagne-Ruel , Christopher P. Kempes , Cole Mathis

Through extensive studies of dynamical system modeling cellular growth and reproduction, we find evidence that complexity arises in multicellular organisms naturally through evolution. Without any elaborate control mechanism, these systems…

适应与自组织系统 · 物理学 2009-10-31 Chikara Furusawa , Kunihiko Kaneko

Molecular chirality is conventionally understood as space-inversion-symmetry breaking in the equilibrium structure of molecules. Less well known is that achiral molecules can be made chiral through extreme rotational excitation. Here, we…

化学物理 · 物理学 2018-11-14 Alec Owens , Andrey Yachmenev , Sergei N. Yurchenko , Jochen Küpper

Tightly confined modes of light, as in optical nanofibers or photonic crystal waveguides, can lead to large optical coupling in atomic systems, which mediates long-range interactions between atoms. These one-dimensional systems can…

量子物理 · 物理学 2016-12-08 Zachary Eldredge , Pablo Solano , Darrick Chang , Alexey V. Gorshkov

Cellular transformations which involve a significant phenotypical change of the cell's state use bistable biochemical switches as underlying decision systems. In this work, we aim at linking cellular decisions taking place on a time scale…

细胞行为 · 定量生物学 2010-05-11 Steffen Waldherr , Jingbo Wu , Frank Allgöwer

To study the fluctuations and dynamics in chemical reaction processes, stochastic differential equations based on the rate equation involving chemical concentrations are often adopted. When the number of molecules is very small, however,…

化学物理 · 物理学 2007-05-23 Yuichi Togashi , Kunihiko Kaneko

According to quantum mechanics chiral molecules, that is molecules that rotate the polarization of light, should not exist. The simplest molecules which can be chiral have four or more atoms with two arrangements of minimal potential energy…

统计力学 · 物理学 2025-01-07 Carlo Presilla , Giovanni Jona-Lasinio

We propose a framework that connects the spatial symmetries of a metasurface to its material parameter tensors and its scattering matrix. This provides a simple yet effective way to effortlessly determine properties of a metasurface…

光学 · 物理学 2022-08-29 Karim Achouri , Ville Tiukuvaara , Olivier J. F. Martin

We present a simple mathematical model that captures the evolutionary capabilities of a prebiotic compartment or protocell. In the model the protocell contains an autocatalytic set whose chemical dynamics is coupled to the growth-division…

种群与进化 · 定量生物学 2023-10-31 Angad Yuvraj Singh , Sanjay Jain

In this paper the first equation within a class of well known chemotaxis systems is derived as a hydrodynamic limit from a stochastic interacting many particle system on the lattice. The cells are assumed to interact with attractive…

概率论 · 数学 2018-04-26 Stefan Grosskinsky , Daniel Marahrens , Angela Stevens
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