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The cellular environment, characterized by its intricate composition and spatial organization, hosts a variety of organelles, ranging from membrane-bound ones to membraneless structures that are formed through liquid-liquid phase…

软凝聚态物质 · 物理学 2026-03-09 Gregor Häfner , Marcus Müller

The organization of live cells to tissues is associated with the mechanical interaction between cells, which is mediated through their elastic environment. We model cells as spherical active force dipoles surrounded by an infinite elastic…

生物物理 · 物理学 2017-06-08 Roman Golkov , Yair Shokef

We consider both theoretically and experimentally self-organization process of quasi-equilibrium steady-state condensation of sputtered substance in accumulative ion-plasma devices. The self-organization effect is shown to be caused by…

统计力学 · 物理学 2015-05-14 V. I. Perekrestov , A. I. Olemskoi , Yu. A. Kosminska , A. A. Mokrenko

The propagation characteristics of fluid vortices, particularly monopoles and dipoles, in a homogeneous viscoelastic fluid were reported in a recent publication [ Phys. Plasmas 23, 013707 (2016)]. In that study, a dusty plasma was modeled…

流体动力学 · 物理学 2025-05-13 Vipul B. Rohit , Vikram S. Dharodi , Sharad K. Yadav

We observe the spontaneous onset of three-dimensional motion from a quiescent, purely conductive state of a stably stratified fluid in a V-shaped enclosure heated from below, which ultimately self-organizes into a two-dimensional steady…

流体动力学 · 物理学 2024-12-23 Patrick J. Stofanak , Cheng-Nian Xiao , Inanc Senocak

Many types of mammalian cells exert active contractile forces and mechanically deform their elastic substrate, to accomplish biological functions such as cell migration. These substrate deformations provide a mechanism by which cells can…

软凝聚态物质 · 物理学 2022-02-22 Subhaya Bose , Patrick S. Noerr , Ajay Gopinathan , Arvind Gopinath , Kinjal Dasbiswas

Melting of two-dimensional (2D) equilibrium crystals, from superconducting vortex lattices to colloidal structures, is a complex phenomenon characterized by the sequential loss of positional and orientational order. Whereas melting…

软凝聚态物质 · 物理学 2021-10-27 Martin James , Dominik Anton Suchla , Jörn Dunkel , Michael Wilczek

We numerically explore the behavior of repelling and aligning self-propelled polar particles (boids) in 2D enclosed by a damped flexible and elastic loop-shaped boundary. We observe disordered, polar ordered (or jammed) and circulating…

软凝聚态物质 · 物理学 2020-06-24 A. C. Quillen , J. P. Smucker , A. Peshkov

Colonies of the social bacterium Myxococcus xanthus go through a morphological transition from a thin colony of cells to three-dimensional droplet-like fruiting bodies as a strategy to survive starvation. The biological pathways that…

We investigate the properties of single vortices and of vortex lattice in a rotating dipolar condensate. We show that vortices in this system possess many novel features induced by the long-range anisotropic dipolar interaction between…

其他凝聚态物理 · 物理学 2009-11-11 S. Yi , H. Pu

Spontaneous directed motion, a hallmark of cell biology, is unusual in classical statistical physics. Here we study, using both numerical and analytical methods, organized motion in models of the cytoskeleton in which constituents are…

软凝聚态物质 · 物理学 2012-05-31 Shenshen Wang , Peter G. Wolynes

Eukaryotic cells are large enough to detect signals and then orient to them by differentiating the signal strength across the length and breadth of the cell. Amoebae, fibroblasts, neutrophils and growth cones all behave in this way. Little…

细胞行为 · 定量生物学 2008-05-19 Liang Li , Simon F. Norrelykke , Edward C. Cox

We analyze a simplistic model for run-and-tumble dynamics, motivated by observations of complex spatio-temporal patterns in colonies of myxobacteria. In our model, agents run with fixed speed either left or right, and agents turn with a…

斑图形成与孤子 · 物理学 2017-12-04 Patrick Flynn , Quinton Neville , Arnd Scheel

How the cells break symmetry and organize their edge activity to move directionally is a fun- damental question in cell biology. Physical models of cell motility commonly rely on gradients of regulatory factors and/or feedback from the…

The spontaneous generation of electrical activity underpins a number of essential physiological processes, and is observed even in tissues where specialized pacemaker cells have not been identified. The emergence of periodic oscillations in…

适应与自组织系统 · 物理学 2022-02-01 Ria Ghosh , Shakti N. Menon

A mathematical model of the metabolic process of formation of the hemostasis in a blood-carrying vessel is constructed. As distinct from the earlier developed model of the multienzyme prostacyclin-thromboxane system of blood, this model…

组织与器官 · 定量生物学 2017-07-19 V. I. Grytsay

Confining surfaces play crucial roles in dynamics, transport and order in many physical systems, but their effects on active matter, a broad class of dynamically self-organizing systems, are poorly understood. We investigate here the…

软凝聚态物质 · 物理学 2013-07-23 Hugo Wioland , Francis G. Woodhouse , Jörn Dunkel , John O. Kessler , Raymond E. Goldstein

Understanding the mechanical instabilities of two-dimensional membranes has strong connection to the subjects of structure instabilities, morphology control and materials failures. In this work, we investigate the plastic mechanism…

软凝聚态物质 · 物理学 2024-04-30 Honghui Sun , Zhenwei Yao

We use coarse-grained molecular dynamics simulations to study the motility of a 2D vesicle containing self-propelled rods, as a function of the vesicle bending rigidity and the number density, length, and activity of the enclosed rods.…

软凝聚态物质 · 物理学 2023-03-29 Sarvesh Uplap , Michael F. Hagan , Aparna Baskaran

The field of active matter explores the behaviors of self propelled agents out of equilibrium, with active suspensions, such as swimming bacteria in solutions, serving as impactful models. These systems exhibit spatio-temporal patterns akin…

软凝聚态物质 · 物理学 2025-08-26 Pratikshya Jena , Shradha Mishra