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相关论文: Boolean Dynamics with Random Couplings

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We study experimentally the synchronization patterns in time-delayed directed Boolean networks of excitable systems. We observe a transition in the network dynamics when the refractory time of the individual systems is adjusted. When the…

适应与自组织系统 · 物理学 2013-03-07 David P. Rosin , Damien Rontani , Daniel J. Gauthier , Eckehard Schöll

The dynamics of an ensemble of bistable elements with global time-delayed coupling under the influence of noise is studied analytically and numerically. Depending on the noise level the system undergoes ordering transitions and demonstrates…

统计力学 · 物理学 2009-11-10 D. Huber , L. S. Tsimring

This article is set in the field of regulation networks modeled by discrete dynamical systems. It focuses on Boolean automata networks. In such networks, there are many ways to update the states of every element. When this is done…

离散数学 · 计算机科学 2015-03-19 Mathilde Noual

The study of the interplay between the structure and dynamics of complex multilevel systems is a pressing challenge nowadays. In this paper, we use a semi-annealed approximation to study the stability properties of Random Boolean Networks…

物理与社会 · 物理学 2012-10-31 Emanuele Cozzo , Alex Arenas , Yamir Moreno

We discuss several classes of integrable Floquet systems, i.e. systems which do not exhibit chaotic behavior even under a time dependent perturbation. The first class is associated with finite-dimensional Lie groups and infinite-dimensional…

统计力学 · 物理学 2018-04-20 Vladimir Gritsev , Anatoli Polkovnikov

The critical boundaries separating ordered from chaotic behavior in randomly wired S-state networks are calculated. These networks are a natural generalization of random Boolean nets and are proposed as on extended approach to genetic…

adap-org · 物理学 2007-05-23 Ricard V. Sole , Bartolo Luque , Stuart Kauffman

We construct a class of period-$n$-tupling discrete time crystals based on $\mathbb{Z}_n$ clock variables, for all the integers $n$. We consider two classes of systems where this phenomenology occurs, disordered models with short-range…

We study the nonequilibrium dynamics of a many-body bosonic system on a lattice, subject to driving and dissipation. The time-evolution is described by a master equation, which we treat within a generalized Gutzwiller mean field…

量子气体 · 物理学 2013-05-29 Andrea Tomadin , Sebastian Diehl , Peter Zoller

We systematically study and compare damage spreading for random Boolean and threshold networks under small external perturbations (damage), a problem which is relevant to many biological networks. We identify a new characteristic…

无序系统与神经网络 · 物理学 2008-04-30 Thimo Rohlf , Natali Gulbahce , Christof Teuscher

Many natural systems are organized as networks, in which the nodes (be they cells, individuals or populations) interact in a time-dependent fashion. The dynamic behavior of these networks depends on how these nodes are connected, which can…

神经元与认知 · 定量生物学 2015-06-22 Anca Radulescu , Sergio Verduzco-Flores

In this work, we investigate a model of an adaptive networked dynamical system, where the coupling strengths among phase oscillators coevolve with the phase states. It is shown that in this model the oscillators can spontaneously…

无序系统与神经网络 · 物理学 2010-11-02 Menghui Li , Shuguang Guan , C. -H. Lai

A Boolean network is a discrete dynamical system operating on vectors of Boolean variables. The action of a Boolean network can be conveniently expressed as a system of Boolean update functions, computing the new values for each component…

形式语言与自动机理论 · 计算机科学 2023-03-02 Artiom Alhazov , Vincent Ferrari-Dominguez , Rudolf Freund , Nicolas Glade , Sergiu Ivanov

Random Boolean networks were introduced in 1969 by Kauffman as a model for gene regulation. By combining analytical arguments and efficient numerical simulations, we evaluate the properties of relevant components of critical random Boolean…

无序系统与神经网络 · 物理学 2009-11-11 V. Kaufman , B. Drossel

This paper presents the foundation for a decomposition theory for Boolean networks, a type of discrete dynamical system that has found a wide range of applications in the life sciences, engineering, and physics. Given a Boolean network…

Interacting biological systems at all organizational levels display emergent behavior. Modeling these systems is made challenging by the number and variety of biological components and interactions (from molecules in gene regulatory…

分子网络 · 定量生物学 2023-10-20 Jordan C. Rozum , Colin Campbell , Eli Newby , Fatemeh Sadat Fatemi Nasrollahi , Reka Albert

During the last few years an area of active research in the field of complex systems is that of their information storing and processing abilities. Common opinion has it that the most interesting beaviour of these systems is found ``at the…

adap-org · 物理学 2007-05-23 Bartolo Luque , Antonio Ferrera

Adaptation to environmental change is a common property of biological systems. Cells initially respond to external changes in the environment, but after some time, they regain their original state. By considering an element consisting of…

生物物理 · 物理学 2015-05-13 Masayo Inoue , Kunihiko Kaneko

One of the outstanding problems in complexity science and dynamical system theory is understanding the dynamic behavior of high-dimensional networked systems and their susceptibility to transitions to undesired states. Because of varied…

动力系统 · 数学 2022-06-24 Chengyi Tu

We study two types of simple Boolean networks, namely two loops with a cross-link and one loop with an additional internal link. Such networks occur as relevant components of critical K=2 Kauffman networks. We determine mostly analytically…

无序系统与神经网络 · 物理学 2009-11-10 V. Kaufman , B. Drossel

Time-discrete dynamical systems on a finite state space have been used with great success to model natural and engineered systems such as biological networks, social networks, and engineered control systems. They have the advantage of being…

组合数学 · 数学 2015-03-17 Alan Veliz-Cuba , Reinhard Laubenbacher