相关论文: Minimal Canonical Comprehensive Groebner Systems
We present McGenus, an algorithm to predict RNA secondary structures with pseudoknots. The method is based on a classification of RNA structures according to their topological genus. McGenus can treat sequences of up to 1000 bases and…
We describe the universal Groebner basis of the ideal of maximal minors and the ideal of $2$-minors of a multigraded matrix of linear forms. Our results imply that the ideals are radical and provide bounds on the regularity. In particular,…
A graph is chordal if every cycle of length at least four contains a chord, that is, an edge connecting two nonconsecutive vertices of the cycle. Several classical applications in sparse linear systems, database management, computer vision,…
We consider the problem of positive-semidefinite continuation: extending a partially specified covariance kernel from a subdomain $\Omega$ of a rectangular domain $I\times I$ to a covariance kernel on the entire domain $I\times I$. For a…
Proving statements about linear operators expressed in terms of identities often leads to finding elements of certain form in noncommutative polynomial ideals. We illustrate this by examples coming from actual operator statements and…
Bayesian inference provides principled uncertainty quantification but is often limited by the challenges of prior and likelihood elicitation. The martingale posterior (MGP) (Fong et al., 2023) offers an alternative by replacing these…
Modular algorithm are widely used in computer algebra systems (CAS), for example to compute efficiently the gcd of multivariate polynomials. It is known to work to compute Groebner basis over $\Q$, but it does not seem to be popular among…
Bayesian inference for doubly-intractable pairwise exponential graphical models typically involves variations of the exchange algorithm or approximate Markov chain Monte Carlo (MCMC) samplers. However, existing methods for both classes of…
The purpose of this work is to generalize part of the theory behind Faugere's "F5" algorithm. This is one of the fastest known algorithms to compute a Groebner basis of a polynomial ideal I generated by polynomials f_{1},...,f_{m}. A major…
We present a new open source C library \texttt{msolve} dedicated to solving multivariate polynomial systems of dimension zero through computer algebra methods. The core algorithmic framework of \texttt{msolve} relies on Gr\''obner bases and…
We consider a large class of matrix problems, which includes the problem of classifying arbitrary systems of linear mappings. For every matrix problem from this class, we construct Belitskii's algorithm for reducing a matrix to a canonical…
The current paper is dedicated to the problem of finding the number of mutually non isomorphic bipartite graphs of the type $g=\langle R_g ,C_g ,E_g \rangle$ at given $n=|R_g |$ and $m=|C_g |$, where $R_g$ and $C_g$ are the two disjoint…
This paper is concerned with the taxonomy of finitely complete categories, based on 'matrix properties' - these are a particular type of exactness properties that can be represented by integer matrices. In particular, the main result of the…
We present and analyse a Monte-Carlo algorithm to compute the minimal polynomial of an $n\times n$ matrix over a finite field that requires $O(n^3)$ field operations and O(n) random vectors, and is well suited for successful practical…
Developed by Buchberger for commutative polynomial rings, Groebner Bases are frequently applied to solve algorithmic problems, such as the congruence problem for ideals. Until now, these ideas have been transmitted to different in part…
The low-rank matrix completion problem can be succinctly stated as follows: given a subset of the entries of a matrix, find a low-rank matrix consistent with the observations. While several low-complexity algorithms for matrix completion…
A canonical system of basic invariants is a system of invariants satisfying a set of differential equations. The properties of a canonical system are related to the mean value property for polytopes. In this article, we naturally identify…
Ihe first author presented an efficient algorithm for computing involutive (and reduced Groebner) bases. In this paper, we consider a modification of this algorithm which simplifies matters to understand it and to implement. We prove…
This paper presents a novel proof that for any convex cone, the size of conically independent generators is at most twice that of minimum cardinality generators. While this result is known for linear spaces, we extend it to general cones…
We study the complexity of solving the \emph{generalized MinRank problem}, i.e. computing the set of points where the evaluation of a polynomial matrix has rank at most $r$. A natural algebraic representation of this problem gives rise to a…