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Suppose N is a phylogenetic network indicating a complicated relationship among individuals and taxa. Often of interest is a much simpler network, for example, a species tree T, that summarizes the most fundamental relationships. The…

种群与进化 · 定量生物学 2015-01-30 Stephen J. Willson

In this paper we continue the study of permutations avoiding the vincular pattern $1-32-4$ by constructing a generating tree with a single label for these permutations. This construction finally provides a clearer explanation of why a…

组合数学 · 数学 2021-03-02 Matteo Cervetti

A generalized Davenport-Schinzel sequence is one over a finite alphabet that contains no subsequences isomorphic to a fixed forbidden subsequence. One of the fundamental problems in this area is bounding (asymptotically) the maximum length…

离散数学 · 计算机科学 2007-07-13 Seth Pettie

We introduce the notions of $\tau$-exceptional and signed $\tau$-exceptional sequences for any finite dimensional algebra. We prove that for a fixed algebra of rank $n$, and for any positive integer $t \leq n$, there is a bijection between…

表示论 · 数学 2021-06-04 Aslak Bakke Buan , Bethany Marsh

We present a new approach to the problem of enumerating permutations of length n that avoid a fixed consecutive pattern of length m. We use this idea to give explicit upper and lower bounds on the number of permutations avoiding a pattern…

组合数学 · 数学 2012-08-29 Guillem Perarnau

We consider uniform random permutations in proper substitution-closed classes and study their limiting behavior in the sense of permutons. The limit depends on the generating series of the simple permutations in the class. Under a mild…

Recently, Babson and Steingrimsson (see \cite{BS}) introduced generalized permutations patterns that allow the requirement that two adjacent letters in a pattern must be adjacent in the permutation. In this paper we study the generating…

组合数学 · 数学 2007-05-23 T. Mansour

Recently, Babson and Steingrimsson have introduced generalised permutation patterns that allow the requirement that two adjacent letters in a pattern must be adjacent in the permutation. We consider pattern avoidance for such patterns, and…

组合数学 · 数学 2007-05-23 Anders Claesson

We look at a family of meta-Fibonacci sequences which arise in studying the number of leaves at the largest level in certain infinite sequences of binary trees, restricted compositions of an integer, and binary compact codes. For this…

组合数学 · 数学 2007-05-23 Brad Jackson , Frank Ruskey

The number of 123-avoiding permutation on $\{1,2,\ldots,n\}$ with a fixed leading terms is counted by the ballot numbers. The same holds for $132$-avoiding permutations. These results were proved by Miner and Pak using the…

组合数学 · 数学 2026-02-24 Ömer Eğecioğlu , Collier Gaiser , Mei Yin

Motivated by a correlation between the distribution of descents over permutations that avoid a consecutive pattern and those avoiding the respective quasi-consecutive pattern, as established in this paper, we obtain a complete $\des$-Wilf…

组合数学 · 数学 2025-02-17 Yan Wang , Qi Fang , Shishuo Fu , Sergey Kitaev , Haijun Li

Phylogenetic networks generalise phylogenetic trees and allow for the accurate representation of the evolutionary history of a set of present-day species whose past includes reticulate events such as hybridisation and lateral gene transfer.…

种群与进化 · 定量生物学 2018-09-05 Joan Carles Pons , Charles Semple , Mike Steel

The enumeration of inversion sequences avoiding a single pattern was initiated by Corteel--Martinez--Savage--Weselcouch and Mansour--Shattuck independently. Their work has sparked various investigations of generalized patterns in inversion…

组合数学 · 数学 2023-06-22 Chunyan Yan , Zhicong Lin

We introduce a permutation analogue of the celebrated Szemeredi Regularity Lemma, and derive a number of consequences. This tool allows us to provide a structural description of permutations which avoid a specified pattern, a result that…

组合数学 · 数学 2007-05-23 Joshua N. Cooper

For a labeled tree on the vertex set $\set{1,2,\ldots,n}$, the local direction of each edge $(i\,j)$ is from $i$ to $j$ if $i<j$. For a rooted tree, there is also a natural global direction of edges towards the root. The number of edges…

组合数学 · 数学 2022-03-22 Heesung Shin , Jiang Zeng

The classes of tree permutations and forest permutations were defined by Acan and Hitczenko (2016). We study random permutations of a given length from these classes, and in particular the number of occurrences of a fixed pattern in one of…

组合数学 · 数学 2022-03-10 Svante Janson

Previous work has shown that the disarray (or displacement) of an (affine) (signed) permutation is bounded in terms of its Coxeter length. Here, we characterize the permutations for which the bound is sharp in two ways: in terms of a…

组合数学 · 数学 2024-04-10 Joel Brewster Lewis , Bridget Eileen Tenner

Given a connected non-negative unit form we construct an extended affine Lie algebra by giving a Chevalley basis for it. We also obtain this algebra as a quotient of an algebra defined by means of generalized Serre relations by M. Barot, D.…

表示论 · 数学 2017-06-15 Gustavo Jasso

In this article, Temperley's bijection between spanning trees of the square grid on the one hand, and perfect matchings (also known as dimer coverings) of the square grid on the other, is extended to the setting of general planar directed…

组合数学 · 数学 2007-05-23 Richard W. Kenyon , James G. Propp , David B. Wilson

It is shown that a group defined by forbidding all patterns of size s+1 that do not appear in a given self-similar group of tree automorphisms is the topological closure of a self-similar, countable, regular branch group, branching over its…

群论 · 数学 2010-12-10 Zoran Sunic