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The Metropolis-Hastings algorithm allows one to sample asymptotically from any probability distribution $\pi$. There has been recently much work devoted to the development of variants of the MH update which can handle scenarios where such…

统计计算 · 统计学 2018-03-28 Christophe Andrieu , Arnaud Doucet , Sinan Yıldırım , Nicolas Chopin

This paper introduces novel method of simulation of lipid biomembranes based on Metropolis Hastings algorithm and Graphic Processing Unit computational power. Method gives up to 55 times computational boost in comparison to classical…

分布式、并行与集群计算 · 计算机科学 2013-09-18 M. Lis , L. Pintal

We show that it is feasible to carry out exact Bayesian inference for non-Gaussian state space models using an adaptive Metropolis Hastings sampling scheme with the likelihood approximated by the particle filter. Furthermore, an adapyive…

统计计算 · 统计学 2009-11-03 Ralph Silva , Paolo Giordani , Robert Kohn , Mike Pitt

Advanced algorithms are necessary to obtain faster-than-real-time dynamic simulations in a number of different physical problems that are characterized by widely disparate time scales. Recent advanced dynamic Monte Carlo algorithms that…

材料科学 · 物理学 2016-11-23 M. A. Novotny

We use an efficient method that eases the daunting task of simulating dynamics in spin systems with long-range interaction. Our Monte Carlo simulations of the long-range Ising model for the nonequilibrium phase ordering dynamics in two…

统计力学 · 物理学 2019-01-23 Henrik Christiansen , Suman Majumder , Wolfhard Janke

Sequential Monte Carlo squared (SMC$^2$; Chopin et al., 2012) methods can be used to sample from the exact posterior distribution of intractable likelihood state space models. These methods are the SMC analogue to particle Markov chain…

统计计算 · 统计学 2023-07-24 Imke Botha , Robert Kohn , Leah South , Christopher Drovandi

The presented article contains a 2D mesh generation routine optimized with the Metropolis algorithm. The procedure enables to produce meshes with a prescribed size h of elements. These finite element meshes can serve as standard discrete…

数值分析 · 数学 2024-10-21 Ilona Dominika Kosinska

A second-order many-body perturbation correction to the relativistic Dirac-Hartree-Fock energy is evaluated stochastically by integrating 13-dimensional products of four-component spinors and Coulomb potentials. The integration in the real…

量子物理 · 物理学 2022-06-16 J. César Cruz , Jorge Garza , Takeshi Yanai , So Hirata

Probabilistic programming languages can simplify the development of machine learning techniques, but only if inference is sufficiently scalable. Unfortunately, Bayesian parameter estimation for highly coupled models such as regressions and…

机器学习 · 统计学 2015-03-10 Yutian Chen , Vikash Mansinghka , Zoubin Ghahramani

Quantum Monte Carlo (QMC) methods can very accurately compute ground state properties of quantum systems. We applied these methods to a system of boson hard spheres to get exact, infinite system size results for the ground state at several…

计算物理 · 物理学 2016-09-08 Mark Dewing

In this article, we present an event-driven algorithm that generalizes the recent hard-sphere event-chain Monte Carlo method without introducing discretizations in time or in space. A factorization of the Metropolis filter and the concept…

统计力学 · 物理学 2014-02-10 Manon Michel , Sebastian C. Kapfer , Werner Krauth

Integer linear programming (ILP) remains computationally challenging due to its NP-complete nature despite its central role in scheduling, logistics, and design optimization. We introduce a fully quantum Metropolis-Hastings algorithm for…

量子物理 · 物理学 2026-02-16 Gabriel Escrig , Roberto Campos , M. A. Martin-Delgado

Hamiltonian Monte Carlo (HMC) improves the computational efficiency of the Metropolis algorithm by reducing its random walk behavior. Riemannian Manifold HMC (RMHMC) further improves HMC's performance by exploiting the geometric properties…

统计计算 · 统计学 2015-06-22 Shiwei Lan , Vassilios Stathopoulos , Babak Shahbaba , Mark Girolami

By analogy with Monte Carlo algorithms, we propose new strategies for design and redesign of small molecule libraries in high-throughput experimentation, or combinatorial chemistry. Several Monte Carlo methods are examined, including…

统计力学 · 物理学 2007-05-23 Ligang Chen , Michael W. Deem

We consider a generalization of the standard Metropolis algorithm acceptance/rejection decision rule and numerically explore its properties using auxiliary field quantum Monte Carlo. The generalization involves a free parameter which, given…

强关联电子 · 物理学 2007-05-23 C. L. Martin , R. M. Fye

We describe collective-move Monte Carlo algorithms designed to approximate the overdamped dynamics of self-assembling nanoscale components equipped with strong, short-ranged and anisotropic interactions. Conventional Monte Carlo simulations…

统计力学 · 物理学 2012-04-16 Stephen Whitelam

We study the thermodynamics of classical Heisenberg model using the multipath approach to Metropolis algorithm Monte Carlo simulation. This simulation approach produces uncorrelated results with known precision. Also, it can be easily…

统计力学 · 物理学 2014-02-21 Petar Mali , Slobodan Radosevic , Predrag S. Rakic , Lazar Stricevic , Tara Petric

Markov Chain Monte Carlo (MCMC) algorithms are commonly used for their versatility in sampling from complicated probability distributions. However, as the dimension of the distribution gets larger, the computational costs for a satisfactory…

宇宙学与河外天体物理 · 物理学 2020-12-01 Hector J. Hortua , Riccardo Volpi , Dimitri Marinelli , Luigi Malago

We propose a new class of interacting Markov chain Monte Carlo (MCMC) algorithms designed for increasing the efficiency of a modified multiple-try Metropolis (MTM) algorithm. The extension with respect to the existing MCMC literature is…

统计计算 · 统计学 2014-03-19 Roberto Casarin , Radu V. Craiu , Fabrizio Leisen

A novel algorithm for computing the action of a matrix exponential over a vector is proposed. The algorithm is based on a multilevel Monte Carlo method, and the vector solution is computed probabilistically generating suitable random paths…

数值分析 · 数学 2019-07-05 Juan A. Acebron , Jose R. Herrero , Jose Monteiro