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The process by which one may take a discrete model of a biophysical process and construct a continuous model based on it is of mathematical interest as well as being of practical use. In this paper, we first study the singular limit of a…

偏微分方程分析 · 数学 2019-01-01 Lianzhang Bao , Zhengfang Zhou

A continuous-time formulation of the Diffusion Monte Carlo method for lattice models is presented. In its simplest version, without the explicit use of trial wavefunctions for importance sampling, the method is an excellent tool for…

强关联电子 · 物理学 2009-11-10 Olav F. Syljuasen

The dynamics of compaction of hard cross-shaped pentamers on the 2D square lattice is investigated. The addition of new particles is controlled by diffusive relaxation. It is shown that the filling process terminates at a glassy phase with…

统计力学 · 物理学 2009-10-31 E. Eisenberg , A. Baram

We propose a theory which describes the density relaxation of loosely packed, cohesionless granular material under mechanical tapping. Using the compactivity concept we develope a formalism of statistical mechanics which allows us to…

无序系统与神经网络 · 物理学 2009-10-30 S. F. Edwards , D. V. Grinev

We present a lattice Monte Carlo algorithm based on the one originally proposed by Maggs and Rossetto for simulating electrostatic interactions in inhomogeneous dielectric media. The original algorithm is known to produce attractive…

软凝聚态物质 · 物理学 2017-05-12 Xiaozheng Duan , Issei Nakamura , Zhen-Gang Wang

We present computer simulations of a dynamic Monte Carlo algorithm for polymer chains on the FCC lattice which takes explicitly into account the possibility to overcome topological constraints by controlling the rate at which nearby polymer…

软凝聚态物质 · 物理学 2021-12-01 Mattia Alberto Ubertini , Angelo Rosa

We investigate the response properties of granular media in the framework of the so-called {\em Random Tetris Model}. We monitor, for different driving procedures, several quantities: the evolution of the density and of the density…

统计力学 · 物理学 2009-10-31 Alain Barrat , Vittorio Loreto

Recent computational investigations in polymeric and non-polymeric binary mixtures have reported anomalous relaxation features when both components exhibit very different mobilities. Anomalous relaxation is characterized by sublinear power…

软凝聚态物质 · 物理学 2015-06-25 Angel J. Moreno , Juan Colmenero

We discuss the use of a ferromagnetic spin model on a random graph to model granular compaction. A multi-spin interaction is used to capture the competition between local and global satisfaction of constraints characteristic for geometric…

无序系统与神经网络 · 物理学 2009-11-07 Johannes Berg , Anita Mehta

A simple numerical model is used to simulate the effect of vertical taps on a packing of monodisperse hard spheres. Our results are in agreement with an experimantal work done in Chicago and with other previous models, especially concerning…

软凝聚态物质 · 物理学 2009-10-31 P. Philippe , D. Bideau

A new master equation to mimic the dynamics of a collection of interacting random walkers in an open system is proposed and solved numerically.In this model, the random walkers interact through excluded volume interaction (single-file…

软凝聚态物质 · 物理学 2007-05-23 Prasanth P Jose , Biman Bagchi

Compact polymers are self-avoiding random walks which visit every site on a lattice. This polymer model is used widely for studying statistical problems inspired by protein folding. One difficulty with using compact polymers to perform…

软凝聚态物质 · 物理学 2009-11-11 Richard Oberdorf , Allison Ferguson , Jesper L. Jacobsen , Jane' Kondev

We demonstrate the use of a new algorithm called the Flat Histogram sampling algorithm for the simulation of lattice polymer systems. Thermodynamics properties, such as average energy or entropy and other physical quantities such as…

统计力学 · 物理学 2009-11-07 Lik Wee Lee , Jian-Sheng Wang

This paper describes the use of simple lattice models for studying the properties of structurally disordered systems like glasses and granulates. The models considered have crystalline states as ground states, finite connectivity, and are…

统计力学 · 物理学 2015-06-24 Alberto Petri

Langevin Monte Carlo (LMC) is an iterative algorithm used to generate samples from a distribution that is known only up to a normalizing constant. The nonasymptotic dependence of its mixing time on the dimension and target accuracy is…

We study by Monte Carlo simulation the compaction dynamics of hard dimers in 2D under the action of gravity, subjected to vertical and horizontal shaking, considering also the case in which a friction force acts for horizontal displacements…

统计力学 · 物理学 2016-08-31 C. Fusco , A. Fasolino , P. Gallo , A. Petri , M. Rovere

The Lorentz lattice gas is studied from the perspective of computational complexity theory. It is shown that using massive parallelism, particle trajectories can be simulated in a time that scales logarithmically in the length of the…

comp-gas · 物理学 2009-10-28 J. Machta , K. Moriarty

We consider a lattice gas interacting by the exclusion rule in the presence of a random field given by i.i.d. bounded random variables in a bounded domain in contact with particles reservoir at different densities. We show, in dimensions $d…

概率论 · 数学 2015-05-13 Mustapha Mourragui , Enza Orlandi

We report the experimental observation of novel vortex patterns in a vertically tapped granular media. Depending on the tapping acceleration two behaviors are observed. For high acceleration a convection vortex appears in the whole media…

其他凝聚态物理 · 物理学 2009-11-11 Philippe Ribiere , Patrick Richard , Renaud Delannay , Daniel Bideau

The reverse Monte Carlo (RMC) method is widely used in structural modelling and analysis of experimental data. More recently, RMC has been applied to the calculation of equilibrium thermodynamic properties and dynamic problems. These…

其他凝聚态物理 · 物理学 2022-12-02 Akash Kumar Ball , Suhail Haque , Abhijit Chatterjee