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Chain-like macromolecules in solution, whether biological or synthetic, transform from an extended conformation to a compact one when temperature or other system parameters change. This collapse transition is relevant in various phenomena,…

软凝聚态物质 · 物理学 2026-05-18 Yanyan Zhu , Haim Diamant , David Andelman

Biopolymers are characterized by heterogeneous interactions, and usually perform their biological tasks forming contacts within domains of limited size. Combining polymer theory with a replica approach, we study the scaling properties of…

生物大分子 · 定量生物学 2015-08-05 Guido Tiana

We have analyzed the equilibrium response of chain molecules to stretching. For a homogeneous sequence of monomers, the induced transition from compact globule to extended coil below the $\theta$-temperature is predicted to be sharp. For…

软凝聚态物质 · 物理学 2009-11-07 Phillip L. Geissler , Eugene I. Shakhnovich

The universality of the swelling of the radius of gyration of a homopolymer relative to its value in the $\theta$ state, independent of polymer-solvent chemistry, in the crossover regime between $\theta$ and athermal solvent conditions, is…

软凝聚态物质 · 物理学 2020-07-03 Aritra Santra , Kiran Kumari , R. Padinhateeri , B. Duenweg , J. Ravi Prakash

The coil-globule transition of an energy polydisperse chain, a model heteropolymer system where the number of monomer species is as large as the total number of monomers, is studied by means of computer simulations. In this study, we…

软凝聚态物质 · 物理学 2022-07-21 Thoudam Vilip Singh , Lenin S. Shagolsem

We analyse scaling laws that govern macromolecules of different topology: polymer chains, homogeneous and miktoarm star polymers in a good solvent possibly constrained by a porous medium. The latter is modelled by long-range-correlated…

软凝聚态物质 · 物理学 2015-05-13 V. Blavatska , C. von Ferber , Yu. Holovatch

Ginzburg-Landau theory of continuous phase transitions implicitly assumes that microscopic changes are negligible in determining the thermodynamic properties of the system. In this work we provide an example that clearly contrasts with this…

统计力学 · 物理学 2022-03-09 Vanja Marić , Gianpaolo Torre , Fabio Franchini , Salvatore Marco Giampaolo

We report dynamic Monte Carlo simulation on conformational transition of H-shaped branched polymers by varying main chain (backbone) and side chain (branch) length. H-shaped polymers in comparison with equivalent linear polymers exhibit a…

软凝聚态物质 · 物理学 2015-06-17 Ashok Kumar Dasmahapatra , Venkata Mahanth Sanka

The critical incompatibility of polymers with different compositions scales inversely with their length. For instance, a mixture of A and B homopolymers of length $N$ segregates at $\chi_{AB}^{cr} = 2/N$. But what if the difference between…

软凝聚态物质 · 物理学 2026-02-06 Artem M. Rumyantsev , Alexey A. Gavrilov

The isothermal, isobaric spontaneous crystallization of a supercooled polymer melt is investigated by MD simulation of an ensemble of fully-flexible linear chains. Frustration is introduced via two incommensurate length scales set by the…

软凝聚态物质 · 物理学 2018-11-19 Andrea Giuntoli , Sebastiano Bernini , Dino Leporini

After a discussion of the definition and number of pseudoknots, we reconsider the self-attracting homopolymer paying particular attention to the scaling of the number of pseudoknots at different temperature regimes in two and three…

统计力学 · 物理学 2009-11-10 A. Kabakcioglu , A. L. Stella

We analyze the impact of a porous medium (structural disorder) on the scaling of the partition function of a star polymer immersed in a good solvent. We show that corresponding scaling exponents change if the disorder is…

软凝聚态物质 · 物理学 2017-08-23 V. Blavats'ka , C. von Ferber , Yu. Holovatch

A directed polymer is allowed to branch, with configurations determined by global energy optimization and disorder. A finite size scaling analysis in 2D shows that, if disorder makes branching more and more favorable, a critical transition…

统计力学 · 物理学 2016-08-31 Giovanni Sartoni , Attilio L. Stella

By an efficient algorithm we evaluate exactly the disorder-averaged statistics of globally neutral self-avoiding chains with quenched random charge $q_i=\pm 1$ in monomer i and nearest neighbor interactions $\propto q_i q_j$ on square (22…

软凝聚态物质 · 物理学 2009-10-31 P. Monari , A. L. Stella

The effect of topology on the collapse transition and instantaneous shape of an energy polydisperse polymer (a model heteropolymer) is studied by means of computer simulations. In particular, we consider three different chain topology,…

软凝聚态物质 · 物理学 2022-11-24 Thoudam Vilip Singh , Lenin S. Shagolsem

We investigate, using numerical simulations and analytical arguments, a simple one dimensional model for the swelling or the collapse of a closed polymer chain of size N, representing the dynamical evolution of a polymer in a \Theta-solvent…

凝聚态物理 · 物理学 2009-10-31 E. Pitard , J. -P. Bouchaud

We consider a statistical mechanical model of a generic flexible polyelectrolyte, comprised of identically charged monomers with long range electrostatic interactions, and short-range interactions quantified by a disorder field along the…

软凝聚态物质 · 物理学 2025-04-24 V. Stepanyan , A. Badasyan , V. Morozov , Y. Mamasakhlisov , R. Podgornik

Cascading failures may lead to dramatic collapse in interdependent networks, where the breakdown takes place as a discontinuity of the order parameter. In the cascading failure (CF) model with healing there is a control parameter which at…

物理与社会 · 物理学 2018-10-17 Marcell Stippinger , János Kertész

The phase structure of a homopolymer chain is investigated in terms of a universal theoretical model, designed to describe the infrared limit of slow spatial variations. The effects of chirality are studied and compared with the influence…

软凝聚态物质 · 物理学 2015-12-25 A. Sinelnikova , A. J. Niemi , M. Ulybyshev

The papers [1,2] consider unbinding of a disordered heteropolymer. They find the first order phase transition [1] when disorder is strong (i.e. the ratio v of the binding energies is large; in DNA v is~1.1) and the Griffiths singularity,…

生物物理 · 物理学 2007-05-23 Mark Ya. Azbel
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