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A complexity-theoretic approach to studying biological networks is proposed. A simple graph representation is used where molecules (DNA, RNA, proteins and chemicals) are vertices and relations between them are directed and signed…

社会与信息网络 · 计算机科学 2018-04-25 Ali Atiia , François Major , Jérôme Waldispühl

In this study, we performed comprehensive morphological investigations of the spontaneous formations of effective network structures among elements in coupled logistic maps, specifically with a delayed connection change. Our proposed model…

适应与自组织系统 · 物理学 2020-12-02 Amika Ohara , Masashi Fujii , Akinori Awazu

We investigate a class of models related to the Bak-Sneppen model, initially proposed to study evolution. The BS model is extremely simple and yet captures some forms of "complex behavior" such as self-organized criticality that is often…

动力系统 · 数学 2015-06-16 J. J. P. Veerman , F. J. Prieto

Inspired by the structure of technological networks, we discuss network evolution mechanisms which give rise to topological properties found in real spatial networks. Thus, the peculiar structure of transport and distribution networks is…

物理与社会 · 物理学 2009-11-13 R. Xulvi-Brunet , I. M. Sokolov

A dynamic model for a random network evolving in continuous time is defined where new vertices are born and existing vertices may die. The fitness of a vertex is defined as the accumulated in-degree of the vertex and a new vertex is…

概率论 · 数学 2015-09-24 Maria Deijfen

Individual nodes in evolving real-world networks typically experience growth and decay --- that is, the popularity and influence of individuals peaks and then fades. In this paper, we study this phenomenon via an intrinsic nodal fitness…

物理与社会 · 物理学 2015-05-20 Xin-Jian Xu , Xiao-Long Peng , Michael Small , Xin-Chu Fu

We study the evolution of networks when the creation and decay of links are based on the position of nodes in the network measured by their centrality. We show that the same network dynamics arises under various centrality measures, and…

物理与社会 · 物理学 2013-05-29 Michael D. Koenig , Claudio J. Tessone

The co-authorship network of scientists represents a prototype of complex evolving networks. By mapping the electronic database containing all relevant journals in mathematics and neuro-science for an eight-year period (1991-98), we infer…

软凝聚态物质 · 物理学 2009-11-07 A. L. Barabasi , H. Jeong , Z. Neda , E. Ravasz , A. Schubert , T. Vicsek

The spring network model constitutes the backbone in the representations of a host of physical systems. In this work, we report the disturbance-driven microscopic dynamics of an isolated, closed spring network of spherical topology in…

软凝聚态物质 · 物理学 2025-08-26 Zhenwei Yao

Biological networks have been recently found to exhibit many topological properties of the so-called complex networks. It has been reported that they are, in general, both highly skewed and directed. In this paper, we report on the dynamics…

分子网络 · 定量生物学 2007-05-23 Jesus Gomez-Gardenes , Yamir Moreno , Luis M. Floria

Flow networks are essential for both living organisms and enginneered systems. These networks often present complex dynamics controlled, at least in part, by their topology. Previous works have shown that topologically complex networks…

软凝聚态物质 · 物理学 2020-03-24 Miguel Ruiz-Garcia , Eleni Katifori

The topology of social networks can be understood as being inherently dynamic, with edges having a distinct position in time. Most characterizations of dynamic networks discretize time by converting temporal information into a sequence of…

数据分析、统计与概率 · 物理学 2012-12-03 Aaron Clauset , Nathan Eagle

Consider the following evolution model, proposed in \cite{BS} by Bak and Sneppen. Put $N$ vertices on a circle, spaced evenly. Each vertex represents a certain species. We associate with each vertex a random variable, representing the…

无序系统与神经网络 · 物理学 2007-05-23 R. Meester , D. Znamenski

Networks such as organizational network of a global company play an important role in a variety of knowledge management and information diffusion tasks. The nodes in these networks correspond to individuals who are self-interested. The…

计算机科学与博弈论 · 计算机科学 2014-10-10 Swapnil Dhamal , Y. Narahari

Neuronal networks constitute a special class of dynamical systems, as they are formed by individual geometrical components, namely the neurons. In the existing literature, relatively little attention has been given to the influence of…

神经元与认知 · 定量生物学 2015-05-13 Sebastian Ahnert , Luciano da Fontoura Costa

We study the evolution of a random weighted network with complex nonlinear dynamics at each node, whose activity may cease as a result of interactions with other nodes. Starting from a knowledge of the micro-level behaviour at each node, we…

统计力学 · 物理学 2007-05-23 Sitabhra Sinha , Sudeshna Sinha

This work examines the problem of topology inference over discrete-time nonlinear stochastic networked dynamical systems. The goal is to recover the underlying digraph linking the network agents, from observations of their state-evolution.…

多智能体系统 · 计算机科学 2019-06-24 Augusto Santos , Vincenzo Matta , Ali H. Sayed

Previous efforts in complex networks research focused mainly on the topological features of such networks, but now also encompass the dynamics. In this Letter we discuss the relationship between structure and dynamics, with an emphasis on…

Self-organization and pattern formation in network-organized systems emerges from the collective activation and interaction of many interconnected units. A striking feature of these non-equilibrium structures is that they are often…

物理与社会 · 物理学 2016-02-23 Christos Nicolaides , Ruben Juanes , Luis Cueto-Felgueroso

Although it is unambiguously agreed that structure plays a fundamental role in shaping the dynamics of complex systems, this intricate relationship still remains unclear. We investigate a general computational transformation by which we can…

无序系统与神经网络 · 物理学 2015-05-13 Jie Zhang , Changsong Zhou , Xiaoke Xu , Michael Small