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相关论文: Charge Transport in DNA-Based Devices

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Digital information can be encoded in the building-block sequence of macromolecules, such as RNA and single-stranded DNA. Methods of "writing" and "reading" macromolecular strands are currently available, but they are slow and expensive. In…

新兴技术 · 计算机科学 2017-09-14 Pramod K. Khulbe , Raphael Gruener , Masud Mansuripur

We consider the influence of electrostatic forces on driven translocation dynamics of a flexible polyelectrolyte being pulled through a nanopore by an external force on the head monomer. To this end, we augment the iso-flux tension…

软凝聚态物质 · 物理学 2020-07-07 Jalal Sarabadani , Sahin Buyukdagli , Tapio Ala-Nissila

Understanding of charge transport mechanisms in nanoscale structures is essential for the development of molecular electronic devices. Charge transport through 1D molecular systems connected between two contacts is influenced by several…

介观与纳米尺度物理 · 物理学 2015-05-18 Daijiro Nozaki , Horacio M. Pastawski , Gianaurelio Cuniberti

Digital information can be encoded in the building-block sequence of macro-molecules, such as RNA and single-stranded DNA. Methods of "writing" and "reading" macromolecular strands are currently available, but they are slow and expensive.…

新兴技术 · 计算机科学 2017-09-14 Masud Mansuripur , Pramod Khulbe

The effect of sequence heterogeneity on polynucleotide translocation across a pore and on simple models of molecular motors such as helicases, DNA polymerase/exonuclease and RNA polymerase is studied in detail. Pore translocation of RNA or…

统计力学 · 物理学 2009-11-10 Yariv Kafri , David K. Lubensky , David R. Nelson

Graphene nanogaps and nanopores show potential for the purpose of electrical DNA sequencing, in particular because single-base resolution appears to be readily achievable. Here, we evaluated from first principles the advantages of a nanogap…

介观与纳米尺度物理 · 物理学 2013-07-29 Jariyanee Prasongkit , Anton Grigoriev , Biswarup Pathak , Rajeev Ahuja , Ralph H. Scheicher

Recent experiments measuring the electrical conductivity of DNA molecules highlight the need for a theoretical model of ion transport along a charged surface. Here we present a simple theory based on the idea of unbinding of ion pairs. The…

软凝聚态物质 · 物理学 2009-10-23 Brian Skinner , M. S. Loth , B. I. Shklovskii

An electron transport is studied in the system which consists of scanning tunneling microscopy-single molecule magnet-metal. Due to quantum tunneling of magnetization in single-molecule magnet, linear response conductance exhibits stepwise…

介观与纳米尺度物理 · 物理学 2009-11-10 Gwang-Hee Kim , Tae-Suk Kim

The transfer of electrons and holes along DNA dimers, trimers and polymers is described at the base-pair level, using the relevant on-site energies of the base-pairs and the hopping parameters between successive base-pairs. The temporal and…

生物物理 · 物理学 2014-07-01 Constantinos Simserides

The trend to fabricate electrical circuits on nanoscale dimensions has led to impressive progress in the field of molecular electronics in the last decade. A theoretical description of molecular contacts as the building blocks of future…

介观与纳米尺度物理 · 物理学 2015-03-19 Denis Kast , Lars Kecke , Joachim Ankerhold

Using numerical modeling we study emergence of structure and structure-related nonlinear conduction properties in the self-assembled nanoparticle films. Particularly, we show how different nanoparticle networks emerge within assembly…

软凝聚态物质 · 物理学 2010-10-07 Milovan Suvakov , Bosiljka Tadic

Using Brownian dynamics simulations, we study the migration of long charged chains in an electrophoretic microchannel device consisting of an array of microscopic entropic traps with alternating deep regions and narrow constrictions. Such a…

生物物理 · 物理学 2007-05-23 Martin Streek , Friederike Schmid , Thanh Tu Duong , Alexandra Ros

Recent papers have considered moving breathers (MBs) in DNA models including long range interaction due to the dipole moments of the hydrogen bonds. We have recalculated the value of the charge transfer when hydrogen bonds stretch using…

斑图形成与孤子 · 物理学 2007-05-23 J. Cuevas , E. B. Starikov , J. F. R. Archilla , D. Hennig

We develop a correlation-corrected transport theory in order to predict ionic and polymer transport properties of membrane nanopores in physical conditions where mean-field electrostatics breaks down. The experimentally observed low KCl…

软凝聚态物质 · 物理学 2014-11-06 Sahin Buyukdagli , Tapio Ala-Nissila

We explore the prospects to control by use of time-dependent fields quantum transport phenomena in nanoscale systems. In particular, we study for driven conductors the electron current and its noise properties. We review recent…

介观与纳米尺度物理 · 物理学 2007-05-23 Sigmund Kohler , Jörg Lehmann , Peter Hänggi

DNA capture with high fidelity is an essential part of nanopore translocation. We report several important aspects of the capture process and subsequent translocation of a model DNA polymer through a solid-state nanopore in presence of an…

软凝聚态物质 · 物理学 2022-07-06 Swarnadeep Seth , Aniket Bhattacharya

Damaged or mismatched bases in DNA can be repaired by Base Excision Repair (BER) enzymes that replace the defective base. Although the detailed molecular structures of many BER enzymes are known, how they colocalize to lesions remains…

生物大分子 · 定量生物学 2009-11-13 Pak-Wing Fok , Chin-Lin Guo , Tom Chou

The ability to control the conductance of single molecules will have a major impact in nanoscale electronics. Azobenzene, a molecule that changes conformation as a result of a trans/cis transition when exposed to radiation, could form the…

介观与纳米尺度物理 · 物理学 2008-11-26 Miriam del Valle , Rafael Gutierrez , Carlos Tejedor , Gianaurelio Cuniberti

Single molecule DNA experiments often generate data from force versus extension measurements involving the tethering of a microsphere to one end of a single DNA molecule while the other is attached to a substrate. We show that the…

生物物理 · 物理学 2015-06-26 Jose Coelho Neto , Ronald Dickman , O. N. Mesquita

We investigate theoretically the translocation of structured RNA/DNA molecules through narrow pores which allow single but not double strands to pass. The unzipping of basepaired regions within the molecules presents significant kinetic…

软凝聚态物质 · 物理学 2009-11-10 Ulrich Gerland , Ralf Bundschuh , Terence Hwa