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相关论文: Randomly evolving trees III

200 篇论文

Two kinds of evolving trees are considered here: the exponential trees, where subsequent nodes are linked to old nodes without any preference, and the Barab\'asi--Albert scale-free networks, where the probability of linking to a node is…

统计力学 · 物理学 2007-05-23 K. Malarz , J. Czaplicki , B. Kawecka-Magiera , K. Kulakowski

An electrical network with the structure of a random tree is considered: starting from a root vertex, in one iteration each leaf (a vertex with zero or one adjacent edges) of the tree is extended by either a single edge with probability $p$…

统计力学 · 物理学 2013-09-25 Ewan Colman , Geoff Rodgers

Predicting the ancestral sequences of a group of homologous sequences related by a phylogenetic tree has been the subject of many studies, and numerous methods have been proposed to this purpose. Theoretical results are available that show…

种群与进化 · 定量生物学 2013-09-05 Olivier Gascuel , Mike Steel

We study fragmentation of a random recursive tree into a forest by repeated removal of nodes. The initial tree consists of N nodes and it is generated by sequential addition of nodes with each new node attaching to a randomly-selected…

统计力学 · 物理学 2014-12-25 Z. Kalay , E. Ben-Naim

We consider growing random recursive trees in random environment, in which at each step a new vertex is attached (by an edge of a random length) to an existing tree vertex according to a probability distribution that assigns the tree…

概率论 · 数学 2007-05-23 Konstantin Borovkov , Vladimir Vatutin

We examine a discrete random recursive tree growth process that, at each time step, either adds or deletes a node from the tree with probability $p$ and $1-p$, respectively. Node addition follows the usual uniform attachment model. For node…

概率论 · 数学 2021-08-03 Arnold Saunders

We investigate extremal statistical properties such as the maximal and the minimal heights of randomly generated binary trees. By analyzing the master evolution equations we show that the cumulative distribution of extremal heights…

统计力学 · 物理学 2007-05-23 E. Ben-Naim , P. L. Krapivsky , Satya N. Majumdar

Understanding the evolution of binary traits, which affects the birth and survival of species and also the rate of molecular evolution, remains challenging. A typical example is the evolution of mating systems in plant species. In this…

种群与进化 · 定量生物学 2017-04-04 Daniah Tahir , Sylvain Glémin , Martin Lascoux , Ingemar Kaj

The hierarchical and recursive expressive capability of rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. On the other hand, such hierarchical…

机器学习 · 计算机科学 2022-01-25 Yuta Nakahara , Shota Saito , Akira Kamatsuka , Toshiyasu Matsushima

The constant rate birth--death process is a popular null model for speciation and extinction. If one removes extinct and non-sampled lineages, this process induces `reconstructed trees' which describe the relationship between extant…

概率论 · 数学 2011-08-01 Tanja Stadler , Mike Steel

We introduce a model for a growing random graph based on simultaneous reproduction of the vertices. The model can be thought of as a generalisation of the reproducing graphs of Southwell and Cannings and Bonato et al to allow for a random…

概率论 · 数学 2011-04-20 Jonathan Jordan

Inspired by [4] we present a new algorithm for uniformly random generation of ordered trees in which all occuring outdegrees can be specified by a given sequence of numbers. The method can be used for random generation of binary or n-ary…

离散数学 · 计算机科学 2021-12-30 Aleksander Kiryk

We prove a strong form of the invariance under re-rooting of the distribution of the continuous random trees called Levy trees. This extends previous results due to several authors.

概率论 · 数学 2009-02-24 Thomas Duquesne , Jean-Francois Le Gall

An evolutionary tree is a cascade of bifurcations starting from a single common root, generating a growing set of daughter species as time goes by. Species here is a general denomination for biological species, spoken languages or any other…

定量方法 · 定量生物学 2013-08-26 Paulo Murilo Castro de Oliveira

We consider a model of stationary population with random size given by a continuous state branching process with immigration with a quadratic branching mechanism. We give an exact elementary simulation procedure of the genealogical tree of…

概率论 · 数学 2020-02-05 Jean-François Delmas , Romain Abraham

We obtain new non-asymptotic tail bounds for the height of uniformly random trees with a given degree sequence, simply generated trees and conditioned Bienaym\'e trees (the family trees of branching processes), in the process settling three…

概率论 · 数学 2024-03-11 Louigi Addario-Berry , Serte Donderwinkel

A well-established model for the genealogy of a large population in equilibrium is Kingman's coalescent. For the population together with its genealogy evolving in time, this gives rise to a time-stationary tree-valued process. We study the…

概率论 · 数学 2010-05-18 Peter Pfaffelhuber , Anton Wakolbinger , Heinz Weisshaupt

The structure of an evolving network contains information about its past. Extracting this information efficiently, however, is, in general, a difficult challenge. We formulate a fast and efficient method to estimate the most likely history…

物理与社会 · 物理学 2020-09-16 Gábor Timár , Rui A. da Costa , Sergey N. Dorogovtsev , José F. F. Mendes

We investigate the statistics of extremal path(s) (both the shortest and the longest) from the root to the bottom of a Cayley tree. The lengths of the edges are assumed to be independent identically distributed random variables drawn from a…

统计力学 · 物理学 2009-10-31 Satya N. Majumdar , P. L. Krapivsky

We extend the results of B. Bollobas, O. Riordan, J. Spencer, G. Tusnady, and Mori. We consider a model of random tree growth, where at each time unit a new node is added and attached to an already existing node chosen at random. The…

概率论 · 数学 2007-05-23 Anna Rudas