相关论文: A Combinatorial Framework for the Pons-Batle Ident…

This paper proposes a tree-based convolutional neural network (TBCNN) for discriminative sentence modeling. Our models leverage either constituency trees or dependency trees of sentences. The tree-based convolution process extracts…

We introduce the Insertion Chain Complex, a higher-dimensional extension of insertion graphs, as a new framework for analyzing finite sets of words. We study its topological and combinatorial properties, in particular its homology groups,…

Rooted phylogenetic networks are often used to represent conflicting phylogenetic signals. Given a set of clusters, a network is said to represent these clusters in the "softwired" sense if, for each cluster in the input set, at least one…

By rewriting the famous hook-content formula it easily follows that there are $\prod\limits_{1 \le i < j \le n} \frac{k_j - k_i + j -i}{j-i}$ semistandard tableaux of shape $(k_n,k_{n-1},...,k_1)$ with entries in $\{1,2,...,n\}$ or,…

An elimination tree for a connected graph $G$ is a rooted tree on the vertices of $G$ obtained by choosing a root $x$ and recursing on the connected components of $G-x$ to produce the subtrees of $x$. Elimination trees appear in many guises…

Unrooted phylogenetic networks are graphs used to represent evolutionary relationships. Accurately reconstructing such networks is of great relevance for evolutionary biology. It has recently been conjectured that all phylogenetic networks…

This paper considers limit theorems associated with subgraph counts in the age-dependent random connection model. First, we identify regimes where the count of sub-trees converges weakly to a stable random variable under suitable…

The classical matrix-tree theorem relates the determinant of the combinatorial Laplacian on a graph to the number of spanning trees. We generalize this result to Laplacians on one- and two-dimensional vector bundles, giving a combinatorial…

We present a method for constructing taxonomic trees (e.g., WordNet) using pretrained language models. Our approach is composed of two modules, one that predicts parenthood relations and another that reconciles those predictions into trees.…

We study the complexity and expressive power of conjunctive queries over unranked labeled trees represented using a variety of structure relations such as ``child'', ``descendant'', and ``following'' as well as unary relations for node…

In this work, we answer an open problem in the study of phylogenetic networks. Phylogenetic trees are rooted binary trees in which all edges are directed away from the root, whereas phylogenetic networks are rooted acyclic digraphs. For the…

The ongoing explosion of genome sequence data is transforming how we reconstruct and understand the histories of biological systems. Across biological scales, from individual cells to populations and species, trees-based models provide a…

The mathematical analysis of random phylogenetic networks via analytic and algorithmic methods has received increasing attention in the past years. In the present work we introduce branching process methods to their study. This approach…

We define two families of determinantal random spanning subgraphs of a finite connected graph, one supported by acyclic spanning subgraphs (spanning forests) with fixed number of connected components, the other by connected spanning…

Tree Ensemble (TE) models, such as Gradient Boosted Trees, often achieve optimal performance on tabular datasets, yet their lack of transparency poses challenges for comprehending their decision logic. This paper introduces TE2Rules (Tree…

In this paper, we introduce two families of planar and self-similar graphs which have small-world properties. The constructed models are based on an iterative process where each step of a certain formulation of modules results in a final…

Uniquely closable skeletons of lambda terms are Motzkin-trees that predetermine the unique closed lambda term that can be obtained by labeling their leaves with de Bruijn indices. Likewise, uniquely typable skeletons of closed lambda terms…

In this paper we propose a notion of pattern avoidance in binary trees that generalizes the avoidance of contiguous tree patterns studied by Rowland and non-contiguous tree patterns studied by Dairyko, Pudwell, Tyner, and Wynn.…

Phylogenetic networks are leaf-labelled directed acyclic graphs that are used to describe non-treelike evolutionary histories and are thus a generalization of phylogenetic trees. The hybridization number of a phylogenetic network is the sum…

In [2], while studying a relevant class of polyominoes that tile the plane by translation, i.e., double square polyominoes, the authors found that their boundary words, encoded by the Freeman chain coding on a four letters alphabet, have…