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Although traditional models of epidemic spreading focus on the number of infected, susceptible and recovered individuals, a lot of attention has been devoted to integrate epidemic models with population genetics. Here we develop an…

种群与进化 · 定量生物学 2021-11-24 Vitor M. Marquioni , Marcus A. M. de Aguiar

In the study of infectious diseases on networks, researchers calculate epidemic thresholds to help forecast whether a disease will eventually infect a large fraction of a population. Because network structure typically changes in time,…

社会与信息网络 · 计算机科学 2021-08-11 Qinyi Chen , Mason A. Porter

Epidemiological contact network models have emerged as an important tool in understanding and predicting the spread of infectious disease, due to their capacity to engage individual heterogeneity that may underlie essential dynamics of a…

物理与社会 · 物理学 2019-10-28 Jack Leitch , Kathleen A. Alexander , Srijan Sengupta

We have performed individual-based lattice simulations of SIR and SEIR dynamics to investigate both the short and long-term dynamics of childhood epidemics. In our model, infection takes place through a combination of local and long-range…

种群与进化 · 定量生物学 2007-05-23 J. Verdasca

We present a modelling framework for the spreading of epidemics on temporal networks from which both the individual-based and pair-based models can be recovered. The proposed temporal pair-based model that is systematically derived from…

物理与社会 · 物理学 2020-11-17 Rory Humphries , Kieran Mulchrone , Jamie Tratalos , Simon More , Philipp Hövel

Infectious diseases that incorporate pre-symptomatic transmission are challenging to monitor, model, predict and contain. We address this scenario by studying a variant of a stochastic susceptible-exposed-infected-recovered model on…

物理与社会 · 物理学 2021-05-07 Bo Li , David Saad

The spreading of epidemics is very much determined by the structure of the contact network, which may be impacted by the mobility dynamics of the individuals themselves. In confined scenarios where a small, closed population spends most of…

物理与社会 · 物理学 2018-05-09 Clara Granell , Peter J. Mucha

We present a contact-based model to study the spreading of epidemics by means of extending the dynamic message passing approach to temporal networks. The shift in perspective from node- to edge-centric quantities enables accurate modelling…

物理与社会 · 物理学 2019-08-07 Andreas Koher , Hartmut H. K. Lentz , James P. Gleeson , Philipp Hövel

Many progresses in the understanding of epidemic spreading models have been obtained thanks to numerous modeling efforts and analytical and numerical studies, considering host populations with very different structures and properties,…

物理与社会 · 物理学 2018-02-02 Antoine Moinet , Alain Barrat , Romualdo Pastor Satorras

Interaction patterns among individuals play vital roles in spreading infectious diseases. Understanding these patterns and integrating their impact in modeling diffusion dynamics of infectious diseases are important for epidemiological…

社会与信息网络 · 计算机科学 2018-04-02 Md Shahzamal , Raja Jurdak , Bernard Mans , Ahmad El Shoghri , Frank De Hoog

The transmission dynamics of some infectious diseases is related to the contact structure between individuals in a network. We used five algorithms to generate contact networks with different topological structure but with the same…

种群与进化 · 定量生物学 2013-08-28 Raul Ossada , José H. H. Grisi-Filho , Fernando Ferreira , Marcos Amaku

Memory has a great impact on the evolution of every process related to human societies. Among them, the evolution of an epidemic is directly related to the individuals' experiences. Indeed, any real epidemic process is clearly sustained by…

物理与社会 · 物理学 2017-03-10 M. Saeedian , M. Khalighi , N. Azimi-Tafreshi , G. R. Jafari , M. Ausloos

In this brief, we study epidemic spreading dynamics taking place in complex networks. We specifically investigate the effect of synergy, where multiple interactions between nodes result in a combined effect larger than the simple sum of…

社会与信息网络 · 计算机科学 2019-04-23 Masaki Ogura , Wenjie Mei , Kenji Sugimoto

We present a series of SIR-network models, extended with a game-theoretic treatment of imitation dynamics which result from regular population mobility across residential and work areas and the ensuing interactions. Each considered…

种群与进化 · 定量生物学 2019-11-14 Sheryl L. Chang , Mahendra Piraveenan , Mikhail Prokopenko

Networks have become an important tool for infectious disease epidemiology. Most previous theoretical studies of transmission network models have either considered simple Markovian dynamics at the individual level, or have focused on the…

种群与进化 · 定量生物学 2015-04-21 Lorenzo Pellis , Simon E. F. Spencer , Thomas House

To understand the contact patterns of a population -- who is in contact with whom, and when the contacts happen -- is crucial for modeling outbreaks of infectious disease. Traditional theoretical epidemiology assumes that any individual can…

种群与进化 · 定量生物学 2015-10-22 Petter Holme

The outbreak of mutant strains and vaccination behaviors have been the focus of recent epidemiological research, but most existing epidemic models failed to simultaneously capture viral mutation and consider the complexity and behavioral…

种群与进化 · 定量生物学 2026-01-16 Wenjie Zhang , Yusheng Li , Qin Li , Guojun Huang , Minyu Feng

We consider the class of SIS epidemic models in which a large population of individuals chooses whether to adopt protection or to remain unprotected as the epidemic evolves. For a susceptible individual, adopting protection reduces the…

系统与控制 · 电气工程与系统科学 2022-03-22 Abhisek Satapathi , Narendra Kumar Dhar , Ashish R. Hota , Vaibhav Srivastava

Throughout the course of an epidemic, the rate at which disease spreads varies with behavioral changes, the emergence of new disease variants, and the introduction of mitigation policies. Estimating such changes in transmission rates can…

统计方法学 · 统计学 2022-11-29 Jenny Huang , Raphaël Morsomme , David Dunson , Jason Xu

Recent years have seen a large amount of interest in epidemics on networks as a way of representing the complex structure of contacts capable of spreading infections through the modern human population. The configuration model is a popular…

种群与进化 · 定量生物学 2017-01-23 Frank Ball , Thomas House