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Topological Data Analysis (TDA) is a rising field of computational topology in which the topological structure of a data set can be observed by persistent homology. By considering a sequence of sublevel sets, one obtains a filtration that…

统计方法学 · 统计学 2020-03-17 Yu-Min Chung , William Cruse , Austin Lawson

Topological data analysis (TDA) has become a powerful approach over the last twenty years, mainly due to its ability to capture the shape and the geometry inherent in the data. Persistence homology, which is a particular tool in TDA, has…

神经元与认知 · 定量生物学 2024-01-12 Anass B. El-Yaagoubi , Shuhao Jiao , Moo K. Chung , Hernando Ombao

In this paper we develop a novel Topological Data Analysis (TDA) approach for studying graph representations of time series of dynamical systems. Specifically, we show how persistent homology, a tool from TDA, can be used to yield a…

混沌动力学 · 物理学 2020-01-28 Audun Myers , Elizabeth Munch , Firas A. Khasawneh

Over the last two decades, topological data analysis (TDA) has emerged as a very powerful data analytic approach which can deal with various data modalities of varying complexities. One of the most commonly used tools in TDA is persistent…

统计方法学 · 统计学 2025-12-08 Anass El Yaagoubi Bourakna , Moo K. Chung , Hernando Ombao

Developing reliable methods to discriminate different transient brain states that change over time is a key neuroscientific challenge in brain imaging studies. Topological data analysis (TDA), a novel framework based on algebraic topology,…

神经元与认知 · 定量生物学 2023-12-19 Moo K. Chung , Soumya Das , Hernando Ombao

Interacting, self-propelled particles such as epithelial cells can dynamically self-organize into complex multicellular patterns, which are challenging to classify without a priori information. Classically, different phases and phase…

定量方法 · 定量生物学 2021-01-19 Dhananjay Bhaskar , William Y. Zhang , Ian Y. Wong

Topological Data Analysis (TDA) is the collection of mathematical tools that capture the structure of shapes in data. Despite computational topology and computational geometry, the utilization of TDA in time series and signal processing is…

信息检索 · 计算机科学 2018-10-23 Shafie Gholizadeh , Wlodek Zadrozny

Topological Data Analysis (TDA) is increasingly crucial in investigating the shape of complex data structures across scientific fields, particularly in neuroscience and finance. This study delves into persistent homology, a TDA component…

物理与社会 · 物理学 2024-09-17 Roel Gisolf , Fernando A. N. Santos , Felix Wierstra

Topological Data Analysis (TDA) has been successfully used for various tasks in signal/image processing, from visualization to supervised/unsupervised classification. Often, topological characteristics are obtained from persistent homology…

声音 · 计算机科学 2023-10-11 Guillem Bonafos , Jean-Marc Freyermuth , Pierre Pudlo , Samuel Tronçon , Arnaud Rey

We present a topological framework for analysing neural time series that integrates Transfer Entropy (TE) with directed Persistent Homology (PH) to characterize information flow in spiking neural systems. TE quantifies directional influence…

神经元与认知 · 定量生物学 2025-08-27 Dylan Peek , Siddharth Pritam , Matthew P. Skerritt , Stephan Chalup

Topological Data Analysis (TDA) is a novel statistical technique, particularly powerful for the analysis of large and high dimensional data sets. Much of TDA is based on the tool of persistent homology, represented visually via persistence…

应用统计 · 统计学 2017-11-07 Sarit Agami , Robert J. Adler

We introduce an innovative, data-driven topological data analysis (TDA) technique for estimating the state spaces of dynamically changing functional human brain networks at rest. Our method utilizes the Wasserstein distance to measure…

代数拓扑 · 数学 2024-04-18 Moo K. Chung , Shih-Gu Huang , Ian C. Carroll , Vince D. Calhoun , H. Hill Goldsmith

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of…

Topological Data Analysis (TDA) has emerged as a powerful framework for extracting robust and interpretable features from noisy high-dimensional data. In the context of Social Choice Theory, where preference profiles and collective…

代数拓扑 · 数学 2025-07-22 Athanasios Andrikopoulos , Nikolaos Sampanis

Topological methods can provide a way of proposing new metrics and methods of scrutinising data, that otherwise may be overlooked. In this work, a method of quantifying the shape of data, via a topic called topological data analysis will be…

机器学习 · 统计学 2022-09-25 Tristan Gowdridge , Nikolaos Dervilis , Keith Worden

Understanding how individuals navigate mental health challenges over time is critical yet methodologically challenging. Traditional approaches analyze community-level snapshots, failing to capture dynamic individual recovery trajectories.…

人机交互 · 计算机科学 2026-03-02 Joydeep Chandra , Satyam Kumar Navneet , Yong Zhang

Topological data analysis (TDA) is an emerging technique for biological signal processing. TDA leverages the invariant topological features of signals in a metric space for robust analysis of signals even in the presence of noise. In this…

代数拓扑 · 数学 2024-01-11 Shashank Manjunath , Jose A. Perea , Aarti Sathyanarayana

One of the most important problems arising in time series analysis is that of bifurcation, or change point detection. That is, given a collection of time series over a varying parameter, when has the structure of the underlying dynamical…

机器学习 · 统计学 2023-03-15 Audun Myers , Firas A. Khasawneh , Elizabeth Munch

In the context of rapid urbanization, understanding the patterns of urban residents' activities and mobility is crucial for optimizing transportation systems and enhancing urban management efficiency. This study addresses the limitations of…

应用统计 · 统计学 2024-06-25 Nuoxian Huang , Yulin Wu

The effectiveness of Spatio-temporal Graph Neural Networks (STGNNs) in time-series applications is often limited by their dependence on fixed, hand-crafted input graph structures. Motivated by insights from the Topological Data Analysis…

机器学习 · 计算机科学 2025-03-20 Viet The Nguyen , Duy Anh Pham , An Thai Le , Jans Peter , Gunther Gust
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