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There is little doubt in scientific circles that--counting from the origin of life towards today--evolution has led to an increase in the amount of information stored within the genomes of the biosphere. This trend of increasing information…

种群与进化 · 定量生物学 2014-08-19 Masoud Mirmomeni , William F. Punch , Christoph Adami

Observations on the past provide some hints about what will happen in the future, and this can be quantified using information theory. The ``predictive information'' defined in this way has connections to measures of complexity that have…

统计力学 · 物理学 2007-05-23 William Bialek , Naftali Tishby

It is high time to openly and without finalism define the dangerous but needed term 'purposeful information', whose quantity is an Eigen information value. Using the term 'biological information' in its stead forces one into an…

适应与自组织系统 · 物理学 2011-12-01 Andrzej Gecow

I propose here a new concept of information based on two relevant aspects of its expression. The first related to the undeniable fact that the expression of information modifies the physical state of its receiver. The second to the…

种群与进化 · 定量生物学 2007-05-23 Antonio Leon

The equations of evolutionary change by natural selection are commonly expressed in statistical terms. Fisher's fundamental theorem emphasizes the variance in fitness. Quantitative genetics expresses selection with covariances and…

种群与进化 · 定量生物学 2012-11-20 Steven A. Frank

Biological organisms adapt to changes by processing informations from different sources, most notably from their ancestors and from their environment. We review an approach to quantify these informations by analyzing mathematical models of…

种群与进化 · 定量生物学 2016-03-23 Olivier Rivoire

Genetic information and environmental factors determine the path of an individuals life and therefore, the evolution of its entire species. We have succeeded in proposing and studying a model that captures this idea. In our model, a…

种群与进化 · 定量生物学 2021-07-28 N. Abadi , G. Abramson

In biology, information flows from the environment to the genome by the process of natural selection. But it has not been clear precisely what sort of information metric properly describes natural selection. Here, I show that Fisher…

种群与进化 · 定量生物学 2009-06-18 Steven A. Frank

The theory of evolution by natural selection cannot be used to evaluate the truth value of the following proposition: Through evolution, there exists at least one species that can adapt to any one given environment. To address this issue,…

生物物理 · 物理学 2022-08-17 Kai Xu

The act of telling stories is a fundamental part of what it means to be human. This work introduces the concept of narrative information, which we define to be the overlap in information space between a story and the items that compose the…

计算与语言 · 计算机科学 2023-02-14 Dylan R. Ashley , Vincent Herrmann , Zachary Friggstad , Jürgen Schmidhuber

In this paper, we wish to investigate the dynamics of information transfer in evolutionary dynamics. We use information theoretic tools to track how much information an evolving population has obtained and managed to retain about different…

种群与进化 · 定量生物学 2021-04-09 Nicholas Guttenberg

A machine that learns a task from observations must encounter and process uncertainty and novelty, especially when it is to maintain performance when observing new information and to select the hypothesis that best fits the current…

机器学习 · 计算机科学 2026-04-17 Derek S. Prijatelj , Timothy J. Ireland , Walter J. Scheirer

We consider biological individuality in terms of information theoretic and graphical principles. Our purpose is to extract through an algorithmic decomposition system-environment boundaries supporting individuality. We infer or detect…

种群与进化 · 定量生物学 2014-12-09 David Krakauer , Nils Bertschinger , Eckehard Olbrich , Nihat Ay , Jessica C. Flack

Biologists measure information in different ways. Neurobiologists and researchers in bioinformatics often measure information using information-theoretic measures such as Shannon's entropy or mutual information. Behavioral biologists and…

种群与进化 · 定量生物学 2007-07-13 Carl T. Bergstrom , Michael Lachmann

The long-term growth rate of populations in varying environments quantifies the evolutionary value of processing the information that biological individuals inherit from their ancestors and acquire from their environment. Previous models…

种群与进化 · 定量生物学 2021-06-30 Anton S Zadorin , Olivier Rivoire

Consider a population of organisms that harvest free energy from their environment to reproduce. This paper shows that if the organisms' reproductive rates are proportional to the amount of physical free energy that they can convert into…

种群与进化 · 定量生物学 2025-11-25 Seth Lloyd

We observe the propagation of information in a system of self-replicating strings of code (``Artificial Life'') as a function of fitness and mutation rate. Comparison with theoretical predictions based on the reaction-diffusion equation…

adap-org · 物理学 2008-02-03 Johan Chu , Chris Adami

Configurational information is generated when three or more sources of variance interact. The variations not only disturb each other relationally, but by selecting upon each other, they are also positioned in a configuration. A…

物理与社会 · 物理学 2009-11-10 Loet Leydesdorff

Life depends as much on the flow of information as on the flow of energy. Here we review the many efforts to make this intuition precise. Starting with the building blocks of information theory, we explore examples where it has been…

定量方法 · 定量生物学 2014-12-31 Gašper Tkačik , William Bialek

Biological evolution depends on the passing down to subsequent generations of genetic information encoding beneficial traits, and on the removal of unfit individuals by a selection mechanism. However, selection acts on phenotypes, and is…

种群与进化 · 定量生物学 2026-05-01 Bastien Mallein , Francesco Paparella , Emmanuel Schertzer , Zsófia Talyigás
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