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Directed graphs can be studied by their associated directed flag complex. The homology of this complex has been successful in applications as a topological invariant for digraphs. Through comparison with path homology theory, we derive a…

代数拓扑 · 数学 2024-11-08 Thomas Chaplin , Heather A. Harrington , Ulrike Tillmann

Persistent homology (PH) has been widely applied to graph data to extract topological features. However, little attention has been paid to how different distance functions on a graph affect the resulting persistence barcodes and their…

代数拓扑 · 数学 2026-02-17 Eunwoo Heo , Byeongchan Choi , Jae-Hun Jung

Determining whether two graphs are isomorphic is a fundamental problem with practical applications in areas such as molecular chemistry or social network analysis, yet it remains a challenging task, with exact solutions often being…

While standard persistent homology has been successful in extracting information from metric datasets, its applicability to more general data, e.g. directed networks, is hindered by its natural insensitivity to asymmetry. We study a…

代数拓扑 · 数学 2017-04-17 Samir Chowdhury , Facundo Mémoli

Persistent homology is a natural tool for probing the topological characteristics of weighted graphs, essentially focusing on their $0$-dimensional homology. While this area has been substantially studied, we present a new approach to…

代数拓扑 · 数学 2023-10-03 Omer Bobrowski , Primoz Skraba

Persistent homology is a mathematical tool used for studying the shape of data by extracting its topological features. It has gained popularity in network science due to its applicability in various network mining problems, including…

代数拓扑 · 数学 2023-06-21 Mehmet Emin Aktas , Thu Nguyen , Rakin Riza , Muhammad Ifte Islam , Esra Akbas

High order networks are weighted hypergraphs col- lecting relationships between elements of tuples, not necessarily pairs. Valid metric distances between high order networks have been defined but they are difficult to compute when the…

社会与信息网络 · 计算机科学 2016-05-04 Weiyu Huang , Alejandro Ribeiro

In real-world systems, the relationships and connections between components are highly complex. Real systems are often described as networks, where nodes represent objects in the system and edges represent relationships or connections…

代数拓扑 · 数学 2024-06-24 Shen Zhang

Persistent Homology (PH) has been successfully used to train networks to detect curvilinear structures and to improve the topological quality of their results. However, existing methods are very global and ignore the location of topological…

计算机视觉与模式识别 · 计算机科学 2022-12-27 Doruk Oner , Adélie Garin , Mateusz Koziński , Kathryn Hess , Pascal Fua

In this paper we consider the problem of graph-based transductive classification, and we are particularly interested in the directed graph scenario which is a natural form for many real world applications. Different from existing research…

计算机视觉与模式识别 · 计算机科学 2014-03-19 Jaydeep De , Xiaowei Zhang , Li Cheng

Topological data analysis can reveal higher-order structure beyond pairwise connections between vertices in complex networks. We present a new method based on discrete Morse theory to study topological properties of unweighted and…

离散数学 · 计算机科学 2019-10-01 Harish Kannan , Emil Saucan , Indrava Roy , Areejit Samal

Persistence diagrams (PDs), often characterized as sets of death and birth of homology class, have been known for providing a topological representation of a graph structure, which is often useful in machine learning tasks. Prior works rely…

机器学习 · 计算机科学 2022-09-29 Chau Pham , Trung Dang , Peter Chin

In this paper we develop a novel Topological Data Analysis (TDA) approach for studying graph representations of time series of dynamical systems. Specifically, we show how persistent homology, a tool from TDA, can be used to yield a…

混沌动力学 · 物理学 2020-01-28 Audun Myers , Elizabeth Munch , Firas A. Khasawneh

We present a unified pipeline for univariate time series classification via complex networks and persistent homology. A time series is mapped to a graph through one of five constructions across three families (visibility (natural and…

代数拓扑 · 数学 2026-05-05 İsmail Güzel

Persistent homology, a technique from computational topology, has recently shown strong empirical performance in the context of graph classification. Being able to capture long range graph properties via higher-order topological features,…

机器学习 · 计算机科学 2024-12-20 Rubén Ballester , Bastian Rieck

We propose an approach to learning with graph-structured data in the problem domain of graph classification. In particular, we present a novel type of readout operation to aggregate node features into a graph-level representation. To this…

机器学习 · 计算机科学 2021-05-18 Christoph D. Hofer , Florian Graf , Bastian Rieck , Marc Niethammer , Roland Kwitt

Persistent homology, a fundamental technique within Topological Data Analysis (TDA), captures structural and shape characteristics of graphs, yet encounters computational difficulties when applied to dynamic directed graphs. This paper…

机器学习 · 计算机科学 2024-08-20 Hao Li , Hao Jiang , Jiajun Fan , Dongsheng Ye , Liang Du

Graphs are commonly used to encode relationships among entities, yet their abstractness makes them difficult to analyze. Node-link diagrams are popular for drawing graphs, and force-directed layouts provide a flexible method for node…

图形学 · 计算机科学 2020-01-14 Ashley Suh , Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen

We define persistent homology groups over any set of spaces which have inclusions defined so that the corresponding directed graph between the spaces is acyclic, as well as along any subgraph of this directed graph. This method…

计算几何 · 计算机科学 2019-06-20 Erin Wolf Chambers , David Letscher

Metric graphs are ubiquitous in science and engineering. For example, many data are drawn from hidden spaces that are graph-like, such as the cosmic web. A metric graph offers one of the simplest yet still meaningful ways to represent the…

计算几何 · 计算机科学 2017-12-05 Tamal K. Dey , Dayu Shi , Yusu Wang
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