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The solution of sparse symmetric positive definite linear systems is an important computational kernel in large-scale scientific and engineering modeling and simulation. We will solve the linear systems using a direct method, in which a…

分布式、并行与集群计算 · 计算机科学 2025-02-13 M. Ozan Karsavuran , Esmond G. Ng , Barry W. Peyton

We present a new variant of serial right-looking supernodal sparse Cholesky factorization (RL). Our comparison of RL with the multifrontal method confirms that RL is simpler, slightly faster, and requires slightly less storage. The key to…

数学软件 · 计算机科学 2024-09-23 M. Ozan Karsavuran , Esmond G. Ng , Barry W. Peyton , Jonathan L. Peyton

Numerical algorithms have two kinds of costs: arithmetic and communication, by which we mean either moving data between levels of a memory hierarchy (in the sequential case) or over a network connecting processors (in the parallel case).…

数值分析 · 计算机科学 2011-02-02 Grey Ballard , James Demmel , Olga Holtz , Oded Schwartz

We consider the swelling of hydrogels as an example of a chemo-mechanical problem with strong coupling between the mechanical balance relations and the mass diffusion. The problem is cast into a minimization formulation using a…

数值分析 · 数学 2022-12-05 Bjoern Kiefer , Stefan Prüger , Oliver Rheinbach , Friederike Röver

LU and Cholesky matrix factorization algorithms are core subroutines used to solve systems of linear equations (SLEs) encountered while solving an optimization problem. Standard factorization algorithms are highly efficient but remain…

数值分析 · 数学 2022-07-25 Adolfo R. Escobedo

Dense kernel matrices resulting from pairwise evaluations of a kernel function arise naturally in machine learning and statistics. Previous work in constructing sparse approximate inverse Cholesky factors of such matrices by minimizing…

统计计算 · 统计学 2025-05-12 Stephen Huan , Joseph Guinness , Matthias Katzfuss , Houman Owhadi , Florian Schäfer

Exact recovery of a sparse solution for an underdetermined system of linear equations implies full search among all possible subsets of the dictionary, which is computationally intractable, while l1 minimization will do the job when a…

信息论 · 计算机科学 2014-12-22 Mohsen Joneidi , Mahdi Barzegar Khalilsarai , Alireza Zaeemzadeh , Nazanin Rahnavard

Symmetric linear solves are fundamental to a wide range of scientific and engineering applications, from climate modeling and structural analysis to machine learning and optimization. These workloads often rely on Cholesky (POTRF)…

分布式、并行与集群计算 · 计算机科学 2026-03-20 Vicki Carrica , Rabab Alomairy , Evelyne Ringoot , Alan Edelman

This paper introduces an efficient sparse recovery approach for Polynomial Chaos (PC) expansions, which promotes the sparsity by breaking the dimensionality of the problem. The proposed algorithm incrementally explores sub-dimensional…

统计计算 · 统计学 2017-04-05 Negin Alemazkoor , Hadi Meidani

In this paper, we consider two fundamental symmetric kernels in linear algebra: the Cholesky factorization and the symmetric rank-$k$ update (SYRK), with the classical three nested loops algorithms for these kernels. In addition, we…

分布式、并行与集群计算 · 计算机科学 2022-02-22 Olivier Beaumont , Lionel Eyraud-Dubois , Mathieu Vérité , Julien Langou

The Riesz maps of the $L^2$ de Rham complex frequently arise as subproblems in the construction of fast preconditioners for more complicated problems. In this work we present multigrid solvers for high-order finite element discretizations…

数值分析 · 数学 2023-12-08 Pablo D. Brubeck , Patrick E. Farrell

Preconditioning techniques are crucial for enhancing the efficiency of solving large-scale linear equation systems that arise from partial differential equation (PDE) discretization. These techniques, such as Incomplete Cholesky…

机器学习 · 计算机科学 2024-12-11 Rui Li , Song Wang , Chen Wang

Covariance estimation for high-dimensional datasets is a fundamental problem in modern day statistics with numerous applications. In these high dimensional datasets, the number of variables p is typically larger than the sample size n. A…

统计方法学 · 统计学 2016-10-11 Kshitij Khare , Sang Oh , Syed Rahman , Bala Rajaratnam

The high computational cost involved in modeling of the progressive fracture simulations using large discrete lattice networks stems from the requirement to solve {\it a new large set of linear equations} every time a new lattice bond is…

材料科学 · 物理学 2009-11-11 Phani Kumar V. V. Nukala , Srdjan Simunovic

We classify a family of matrices of shift operators that can be factorised in a computationally tractable manner with the Cholesky algorithm. Such matrices arise in the linear quadratic regulator problem, and related areas. We use the…

最优化与控制 · 数学 2026-02-04 Julia Adlercreutz , Richard Pates

We review strategies for differentiating matrix-based computations, and derive symbolic and algorithmic update rules for differentiating expressions containing the Cholesky decomposition. We recommend new `blocked' algorithms, based on…

统计计算 · 统计学 2016-02-25 Iain Murray

This survey describes a class of methods known as "fast direct solvers". These algorithms address the problem of solving a system of linear equations $\boldsymbol{Ax}=\boldsymbol{b}$ arising from the discretization of either an elliptic PDE…

数值分析 · 数学 2025-11-12 Per-Gunnar Martinsson , Michael O'Neil

Researchers are increasingly incorporating numeric high-order data, i.e., numeric tensors, within their practice. Just like the matrix/vector (MV) paradigm, the development of multi-purpose, but high-performance, sparse data structures and…

数学软件 · 计算机科学 2018-02-09 Adam P. Harrison , Dileepan Joseph

We consider the multidimensional space-fractional diffusion equations with spatially varying diffusivity and fractional order. Significant computational challenges are encountered when solving these equations due both to the kernel…

数值分析 · 数学 2021-08-31 Hasnaa Alzahrani , George Turkiyyah , Omar Knio , David Keyes

A hierarchical solver is proposed for solving sparse ill-conditioned linear systems in parallel. The solver is based on a modification of the LoRaSp method, but employs a deferred-compression technique, which provably reduces the…