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The simplest possible informational heteropolymer requires only a two-letter alphabet to be able to store information. The evolutionary choice of four monomers in the informational biomolecules RNA/DNA or their progenitors is intriguing,…

基因组学 · 定量生物学 2022-11-17 Hemachander Subramanian

The RNA World hypothesis predicts that self-replicating RNAs evolved before DNA genomes and coded proteins. Despite widespread support for the RNA World, self-replicating RNAs have yet to be identified in a natural context, leaving a key…

生物大分子 · 定量生物学 2025-03-12 Jacob L. Fine , Alan M. Moses

Implicit in the RNA world hypothesis is that prebiotic RNA synthesis, despite occurring in an environment without biochemical catalysts, produced the long RNA polymers which are essential to the formation of life. In order to investigate…

化学物理 · 物理学 2020-04-27 Alex Spaeth , Mason Hargrave

Prior to the origin of simple cellular life, the building blocks of RNA (nucleotides) had to form and polymerize in favourable environments on the early Earth. At this time, meteorites and interplanetary dust particles delivered organics…

地球与行星天体物理 · 物理学 2017-10-26 Ben K. D. Pearce , Ralph E. Pudritz , Dmitry A. Semenov , Thomas K. Henning

Self-replicability is the unique attribute observed in all the living organisms and the question how the life was physically initiated could be equivalent to the question how self-replicating informative polymers were formed in the abiotic…

生物物理 · 物理学 2023-05-24 Yasuji Sawada , Yasukazu Daigaku , Kenji Toma

The emergence of self-replication and information transmission in life's origin remains unexplained despite extensive research on the topic. A hypothesis explaining the transition from a simple organic world to a complex RNA world is…

生物大分子 · 定量生物学 2013-05-27 Stan Palasek

A central challenge in the origin of life is understanding how catalytic peptide-like polymers and information-bearing nucleic acid-like polymers emerged as an interde-pendent system. This study constructs a primordial cognitive model…

其他定量生物学 · 定量生物学 2026-05-11 Takeshi Ishida

Many models for the origin of life have focused on understanding how evolution can drive the refinement of a preexisting enzyme, such as the evolution of efficient replicase activity. Here we present a model for what was, arguably, an even…

生物大分子 · 定量生物学 2012-12-20 Sara Imari Walker , Martha A. Grover , Nicholas V. Hud

It is suggested that life originated in a three-step process referred to as the jigsaw model. RNA, proteins, or similar organic molecules polymerized in a dehydrated carbon-rich environment, on surfaces in a carbon-rich environment, or in…

适应与自组织系统 · 物理学 2015-06-26 John F. Mcgowan

A mechanism of the replication of proto-RNAs in oligomer world is proposed. The replication is carried out by a minimum cycle which is sustained by a ligase and a helicase. We expect that such a cycle actually worked in the primordial soup…

生物大分子 · 定量生物学 2013-06-04 Daisuke Sato , Osamu Narikiyo

Abiotic emergence of ordered information stored in the form of RNA is an important unresolved problem concerning the origin of life. A polymer longer than 40--100 nucleotides is necessary to expect a self-replicating activity, but the…

种群与进化 · 定量生物学 2020-02-04 Tomonori Totani

Selected ribonucleotide sequences bind well to zwitterionic phospholipid bilayer membranes, though randomized RNAs do not. There are no evident repeated sequences in selected membrane binding RNAs. This implies small and varied motifs…

生物大分子 · 定量生物学 2025-02-04 Michael Yarus

Due to the asymmetric nature of the nucleotides, the extant informational biomolecule, DNA, is constrained to replicate unidirectionally on a template. As a product of molecular evolution that sought to maximize replicative potential, DNA's…

生物大分子 · 定量生物学 2017-08-10 Hemachander Subramanian , Robert A. Gatenby

Polymerases are protein enzymes that move along nucleic acid chains and catalyze template-based polymerization reactions during gene transcription and replication. The polymerases also substantially improve transcription or replication…

生物物理 · 物理学 2017-01-19 Jin Yu

Formation of base pairs between the nucleotides of an RNA sequence gives rise to a complex and often highly branched RNA structure. While numerous studies have demonstrated the functional importance of the high degree of RNA branching --…

生物物理 · 物理学 2023-06-21 Domen Vaupotič , Angelo Rosa , Luca Tubiana , Anže Božič

Each living species carries a complex DNA sequence that determines their unique features and functionalities. It is generally assumed that life started from a random pool of oligonucleotides sequences, generated by a prebiotic…

生物物理 · 物理学 2019-04-03 Shoichi Toyabe , Dieter Braun

The RNA world hypothesis suggests a pathway of how life emerged on early earth. It assumes that life started with RNA based systems, capable of storing, transmitting and replicating information, envisioning that monomers and short RNA…

生物物理 · 物理学 2026-04-29 Johannes Harth-Kitzerow , Ulrich Gerland , Torsten A. Enßlin

The aims of this paper are to propose, construct and analyse microscopic kinetic models for the emergence of long chains of RNA from monomeric beta-D-ribonucleotide precursors in prebiotic circumstances. Our theory starts out from similar…

adap-org · 物理学 2007-05-23 Jonathan A. D. Wattis , Peter V. Coveney

DNA renaturation is the recombination of two complementary single strands to form a double helix. It is experimentally known that renaturation proceeds through the formation of a double stranded nucleus of several base pairs (the rate…

软凝聚态物质 · 物理学 2010-04-12 A. Ferrantini , M. Baiesi , E. Carlon

Since the Hadean era of Earth's history, peptides/proteins and RNA have undergone a complex evolutionary trajectory. Originating from simple monomeric units, these molecules evolved abiotically under various biochemical and biophysical…

生物物理 · 物理学 2025-05-06 Michal H. Kolář , Klára Hlouchová
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