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This paper proposes a two-stage segmentation model, variable-input based uncertainty measures and an uncertainty-guided post-processing method for prostate segmentation on 3D magnetic resonance images (MRI). The two-stage model was based on…

计算机视觉与模式识别 · 计算机科学 2019-03-07 Huitong Pan , Yushan Feng , Quan Chen , Craig Meyer , Xue Feng

We propose a novel automatic method for accurate segmentation of the prostate in T2-weighted magnetic resonance imaging (MRI). Our method is based on convolutional neural networks (CNNs). Because of the large variability in the shape, size,…

图像与视频处理 · 电气工程与系统科学 2020-01-01 Davood Karimi , Golnoosh Samei , Yanan Shao , Septimiu Salcudean

Segmentation is a fundamental task in medical image analysis. The clinical interest is often to measure the volume of a structure. To evaluate and compare segmentation methods, the similarity between a segmentation and a predefined ground…

图像与视频处理 · 电气工程与系统科学 2020-10-09 Jeroen Bertels , David Robben , Dirk Vandermeulen , Paul Suetens

Muscle volume is a useful quantitative biomarker in sports, but also for the follow-up of degenerative musculo-skelletal diseases. In addition to volume, other shape biomarkers can be extracted by segmenting the muscles of interest from…

计算机视觉与模式识别 · 计算机科学 2023-11-01 Louise Piecuch , Vanessa Gonzales Duque , Aurélie Sarcher , Enzo Hollville , Antoine Nordez , Giuseppe Rabita , Gaël Guilhem , Diana Mateus

The clinical interest is often to measure the volume of a structure, which is typically derived from a segmentation. In order to evaluate and compare segmentation methods, the similarity between a segmentation and a predefined ground truth…

计算机视觉与模式识别 · 计算机科学 2022-11-09 Jeroen Bertels , David Robben , Dirk Vandermeulen , Paul Suetens

Kidney abnormality segmentation has important potential to enhance the clinical workflow, especially in settings requiring quantitative assessments. Kidney volume could serve as an important biomarker for renal diseases, with changes in…

Segmentation of skeletal muscles in Magnetic Resonance Images (MRI) is essential for the study of muscle physiology and diagnosis of muscular pathologies. However, manual segmentation of large MRI volumes is a time-consuming task. The…

计算机视觉与模式识别 · 计算机科学 2019-04-10 Rafael Rodrigues , Antonio M. G. Pinheiro

The quantity and quality of muscles are increasingly recognized as important predictors of health outcomes. While MRI offers a valuable modality for such assessments, obtaining precise quantitative measurements of musculature remains…

We propose a novel hands-free method to interactively segment 3D medical volumes. In our scenario, a human user progressively segments an organ by answering a series of questions of the form "Is this voxel inside the object to segment?". At…

计算机视觉与模式识别 · 计算机科学 2016-09-21 Florian Dubost , Loic Peter , Christian Rupprecht , Benjamin Gutierrez-Becker , Nassir Navab

Current medical image segmentation relies on the region-based (Dice, F1-score) and boundary-based (Hausdorff distance, surface distance) metrics as the de-facto standard. While these metrics are widely used, they lack a unified…

图像与视频处理 · 电气工程与系统科学 2024-05-15 Zheyuan Zhang , Ulas Bagci

Objectives: To present a publicly available deep learning-based torso segmentation model that provides comprehensive voxel-wise coverage, including delineations that extend to the boundaries of anatomical compartments. Materials and…

Prostate radiotherapy is a well established curative oncology modality, which in future will use Magnetic Resonance Imaging (MRI)-based radiotherapy for daily adaptive radiotherapy target definition. However the time needed to delineate the…

图像与视频处理 · 电气工程与系统科学 2020-11-17 David Gillespie , Connah Kendrick , Ian Boon , Cheng Boon , Tim Rattay , Moi Hoon Yap

Placenta volume measurement from 3D ultrasound images is critical for predicting pregnancy outcomes, and manual annotation is the gold standard. However, such manual annotation is expensive and time-consuming. Automated segmentation…

计算机视觉与模式识别 · 计算机科学 2024-07-12 Hao Li , Baris Oguz , Gabriel Arenas , Xing Yao , Jiacheng Wang , Alison Pouch , Brett Byram , Nadav Schwartz , Ipek Oguz

Purpose: This paper presents the preliminary results of a semi-automatic method for prostate segmentation of Magnetic Resonance Images (MRI) which aims to be incorporated in a navigation system for prostate brachytherapy. Methods: The…

其他计算机科学 · 计算机科学 2008-12-18 Sébastien Martin , Vincent Daanen , Jocelyne Troccaz

Prostate cancer represents a major threat to health. Early detection is vital in reducing the mortality rate among prostate cancer patients. One approach involves using multi-modality (CT, MRI, US, etc.) computer-aided diagnosis (CAD)…

图像与视频处理 · 电气工程与系统科学 2024-07-10 Rui Jin , Derun Li , Dehui Xiang , Lei Zhang , Hailing Zhou , Fei Shi , Weifang Zhu , Jing Cai , Tao Peng , Xinjian Chen

Magnetic resonance elastography (MRE) for measuring viscoelasticity heavily depends on proper tissue segmentation, especially in heterogeneous organs such as the prostate. Using trained network-based image segmentation, we investigated if…

图像与视频处理 · 电气工程与系统科学 2021-06-22 Nader Aldoj , Federico Biavati , Marc Dewey , Anja Hennemuth , Patrick Asbach , Ingolf Sack

The most common primary brain tumors are gliomas, evolving from the cerebral supportive cells. For clinical follow-up, the evaluation of the preoperative tumor volume is essential. Volumetric assessment of tumor volume with manual…

计算机视觉与模式识别 · 计算机科学 2011-03-11 Jan Egger , Dženan Zukić , Miriam H. A. Bauer , Daniela Kuhnt , Barbara Carl , Bernd Freisleben , Andreas Kolb , Christopher Nimsky

The UK Biobank is collecting extensive data on health-related characteristics of over half a million volunteers. The biological samples of blood and urine can provide valuable insight on kidney function, with important links to…

Deep learning models (DLMs) can achieve state-of-the-art performance in histopathology image segmentation and classification, but have limited deployment potential in real-world clinical settings. Uncertainty estimates of DLMs can increase…

图像与视频处理 · 电气工程与系统科学 2024-12-31 Audrey Xie , Elhoucine Elfatimi , Sambuddha Ghosal , Pratik Shah

Placenta volume measured from 3D ultrasound (3DUS) images is an important tool for tracking the growth trajectory and is associated with pregnancy outcomes. Manual segmentation is the gold standard, but it is time-consuming and subjective.…

图像与视频处理 · 电气工程与系统科学 2024-08-13 Hao Li , Baris Oguz , Gabriel Arenas , Xing Yao , Jiacheng Wang , Alison Pouch , Brett Byram , Nadav Schwartz , Ipek Oguz
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