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Ash dieback (Hymenoscyphus fraxineus) is an introduced fungal disease that is causing the widespread death of ash trees across Europe. Remote sensing hyperspectral images encode rich structure that has been exploited for the detection of…

计算机视觉与模式识别 · 计算机科学 2022-04-20 Sam L. Polk , Aland H. Y. Chan , Kangning Cui , Robert J. Plemmons , David A. Coomes , James M. Murphy

Species distribution models (SDMs) are important statistical tools for ecologists to understand and predict species range. However, standard SDMs do not explicitly incorporate dynamic processes like dispersal. This limitation may lead to…

种群与进化 · 定量生物学 2021-08-27 Julie Louvrier , Julien Papaïx , Christophe Duchamp , Olivier Gimenez

Ash dieback (ADB) is threatening populations of European ash (Fraxinus excelsior & F. angustifolia) for more than three decades. Although much knowledge has been gathered in the recent past, practical conservation measures have been mostly…

Infectious diseases on farms pose both public and animal health risks, so understanding how they spread between farms is crucial for developing disease control strategies to prevent future outbreaks. We develop novel Bayesian nonparametric…

应用统计 · 统计学 2021-08-24 R. G. Seymour , T. Kypraios , P. D. O'Neill , T. J. Hagenaars

Flavescence dor\'ee (FD) is a disease of grapevine transmitted by an insect vector, $Scaphoideus$ $titanus$ Ball. At present, no prophylaxis exists, so mandatory control procedures (e.g. removal of infected plants, and insecticidal sprays…

种群与进化 · 定量生物学 2014-07-16 Federico Lessio , Alessandro Portaluri , Francesco Paparella , Alberto Alma

The steady state properties of the mean density population of infected cells in a viral spread is simulated by a general forest fire like cellular automaton model with two distinct populations of cells ( permissive and resistant ones) and…

adap-org · 物理学 2008-02-03 G. Camelo-Neto , S. Coutinho

We introduce a spatially extended mathematical model for Duchenne muscular dystrophy based on a damage-driven paradigm, in which immune recruitment is triggered by tissue injury. The model is formulated as a reaction--diffusion--chemotaxis…

数学物理 · 物理学 2026-04-06 Gaetana Gambino , Francesco Gargano , Alessandra Rizzo , Vincenzo Sciacca

African swine fever (ASF) is a highly virulent viral disease that affects both domestic pigs and wild boar. Current ASF transmission in Europe is in part driven by wild boar populations, which act as a disease reservoir. Wild boar are…

种群与进化 · 定量生物学 2023-09-15 Callum Shaw , Angus McLure , Kathryn Glass

The spread of African swine fever (ASF) poses a grave threat to the global swine industry. Understanding transmission dynamics, such as through mechanistic modeling, is critical for designing effective control strategies. Articles were…

种群与进化 · 定量生物学 2021-04-30 Brandon H Hayes , Mathieu Andraud , Luis G Salazar , Nicolas Rose , Timothee Vergne

A demographic Allee effect occurs when individual fitness, at low densities, increases with population density. Coupled with environmental fluctuations in demographic rates, Allee effects can have subtle effects on population persistence…

概率论 · 数学 2014-05-08 Gregory Roth , Sebastian Schreiber

The economic consequences of drought episodes are increasingly important, although they are often difficult to apprehend in part because of the complexity of the underlying mechanisms. In this article, we will study one of the consequences…

应用统计 · 统计学 2022-08-17 Arthur Charpentier , Molly James , Hani Ali

Transmission rates are key in understanding the spread of infectious diseases. Using the framework of compartmental models, we introduce a simple method that enables us to reconstruct time series of transmission rates directly from…

定量方法 · 定量生物学 2016-05-06 Alexander Lange

In this study, we introduce a novel and comprehensive extension of a Bayesian spatio-temporal disease mapping model that explicitly accounts for gender-specific effects of meteorological exposures. Leveraging fine-scale weekly mortality and…

应用统计 · 统计学 2025-07-18 Corinna Perchtold , Julia Eisenberg , Philipp Otto

Infectious diseases often spread faster near their peak than would be predicted given early data on transmission. Despite the commonality of this phenomena, there are no known general mechanisms able to cause an exponentially spreading dis-…

定量方法 · 定量生物学 2017-07-06 Samuel V. Scarpino , Antoine Allard , Laurent Hebert-Dufresne

Seasonal influenza epidemics cause consistent, considerable, widespread loss annually in terms of economic burden, morbidity, and mortality. With access to accurate and reliable forecasts of a current or upcoming influenza epidemic's…

种群与进化 · 定量生物学 2016-02-17 Logan C. Brooks , David C. Farrow , Sangwon Hyun , Ryan J. Tibshirani , Roni Rosenfeld

African Swine Fever (ASF) represents the main threat to swine production, with heavy economic consequences for both farmers and the food industry. The spread of the virus that causes ASF through Europe raises the issues of identifying…

Spatio-temporal pathogen spread is often partially observed at the metapopulation scale. Available data correspond to proxies and are incomplete, censored and heterogeneous. Moreover, representing such biological systems often leads to…

种群与进化 · 定量生物学 2023-12-04 Gaël Beaunée , Pauline Ezanno , Alain Joly , Pierre Nicolas , Elisabeta Vergu

The reconstruction of phylogenetic trees based on viral genetic sequence data sequentially sampled from an epidemic provides estimates of the past transmission dynamics, by fitting epidemiological models to these trees. To our knowledge,…

种群与进化 · 定量生物学 2013-06-17 Amaury Lambert , Helen K. Alexander , Tanja Stadler

In this article, we focus on the analysis of the potential factors driving the spread of influenza, and possible policies to mitigate the adverse effects of the disease. To be precise, we first invoke discrete Fourier transform (DFT) to…

机器学习 · 计算机科学 2019-12-09 Ziming Liu , Yixuan Wang , Zizhao Han , Dian Wu

In this paper, the authors develop a method of detecting correlations between epidemic patterns in different regions that are due to human movement and introduce a null model in which the travel-induced correlations are cancelled. They…

种群与进化 · 定量生物学 2008-06-24 Pascal Crépey , Marc Barthélemy
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